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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5671 A_BomoEE_comp1087434_c0_seq1
204bp
FPKM:0.00 TPM:0.00
5672 A_BomoEE_comp1087500_c0_seq1
468bp
FPKM:0.25 TPM:0.43
5673 A_BomoEE_comp108752_c0_seq1
623bp
FPKM:1.08 TPM:1.88
5674 A_BomoEE_comp1087551_c0_seq1
613bp
 PREDICTED:_uncharacterized_protein_LOC105344175_[Crassostrea_gigas]
FPKM:0.22 TPM:0.38
5675 A_BomoEE_comp10875_c0_seq1
571bp
FPKM:0.00 TPM:0.00
5676 A_BomoEE_comp10875_c0_seq2
627bp
FPKM:0.25 TPM:0.43
5677 A_BomoEE_comp1087628_c0_seq1
226bp
FPKM:0.27 TPM:0.48
5678 A_BomoEE_comp1087649_c0_seq1
247bp
FPKM:0.42 TPM:0.73
5679 A_BomoEE_comp1087680_c0_seq1
743bp
FPKM:0.20 TPM:0.35
5680 A_BomoEE_comp1087700_c0_seq1
282bp
 hypothetical_protein_V499_08300_[Pseudogymnoascus_sp._VKM_F-103]
FPKM:0.37 TPM:0.64
5681 A_BomoEE_comp1087724_c0_seq1
1546bp
FPKM:0.21 TPM:0.36
5682 A_BomoEE_comp1087766_c0_seq1
263bp
FPKM:0.09 TPM:0.15
5683 A_BomoEE_comp1087772_c0_seq1
440bp
FPKM:0.24 TPM:0.42
5684 A_BomoEE_comp10877_c0_seq1
207bp
FPKM:0.19 TPM:0.32
5685 A_BomoEE_comp1087827_c0_seq1
573bp
 PREDICTED:_uncharacterized_protein_LOC105841320_[Bombyx_mori]
FPKM:0.18 TPM:0.32
5686 A_BomoEE_comp10878_c0_seq1
431bp
 PREDICTED:_glutamate_receptor_ionotropic,_kainate_2-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007268 P chemical synaptic transmission
GO:0007399 P nervous system development
GO:0008144 F obsolete drug binding
GO:0008328 C ionotropic glutamate receptor complex
GO:0015277 F kainate selective glutamate receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016595 F glutamate binding
GO:0022843 F voltage-gated cation channel activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0032229 P negative regulation of synaptic transmission, GABAergic
GO:0032230 P positive regulation of synaptic transmission, GABAergic
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043195 C terminal bouton
GO:0043235 C receptor complex
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048167 P regulation of synaptic plasticity
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0051967 P negative regulation of synaptic transmission, glutamatergic
FPKM:0.17 TPM:0.29
5687 A_BomoEE_comp10878_c0_seq2
235bp
 PREDICTED:_glutamate_receptor_ionotropic,_kainate_2-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0004971 F AMPA glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005231 F excitatory extracellular ligand-gated ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007165 P signal transduction
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030666 C endocytic vesicle membrane
GO:0032281 C AMPA glutamate receptor complex
GO:0034220 P ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
FPKM:0.32 TPM:0.56
5688 A_BomoEE_comp108796_c0_seq1
477bp
FPKM:0.29 TPM:0.51
5689 A_BomoEE_comp1087_c0_seq1
296bp
FPKM:0.26 TPM:0.46
5690 A_BomoEE_comp1087_c1_seq1
201bp
FPKM:0.42 TPM:0.73
5691 A_BomoEE_comp1088132_c0_seq1
221bp
 hypothetical_protein_RirG_033840_[Rhizophagus_irregularis_DAOM_197198w]
FPKM:0.29 TPM:0.51
5692 A_BomoEE_comp108815_c0_seq1
503bp
FPKM:10.08 TPM:17.59
5693 A_BomoEE_comp1088202_c0_seq1
672bp
 PREDICTED:_serine_protease_inhibitor_29_isoform_X1_[Bombyx_mori]
FPKM:0.16 TPM:0.28
5694 A_BomoEE_comp1088212_c0_seq1
405bp
 hypothetical_protein_TREMEDRAFT_40960_[Tremella_mesenterica_DSM_1558]
FPKM:0.24 TPM:0.43
5695 A_BomoEE_comp1088238_c0_seq1
426bp
FPKM:0.35 TPM:0.62
5696 A_BomoEE_comp1088243_c0_seq1
249bp
FPKM:0.20 TPM:0.36
5697 A_BomoEE_comp10882_c0_seq1
1020bp
FPKM:0.34 TPM:0.60
5698 A_BomoEE_comp1088308_c0_seq1
262bp
FPKM:0.27 TPM:0.46
5699 A_BomoEE_comp1088413_c0_seq1
783bp
 TetR_family_transcriptional_regulator_[Streptomyces_sp._NRRL_S-4]
FPKM:0.24 TPM:0.42
5700 A_BomoEE_comp1088433_c0_seq1
230bp
FPKM:0.39 TPM:0.68
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