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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5431 A_BomoEE_comp107891_c0_seq1
1867bp
 PREDICTED:_protein_ELYS_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0034399 C nuclear periphery
GO:0051292 P nuclear pore complex assembly
FPKM:7.86 TPM:13.72
5432 A_BomoEE_comp1078923_c0_seq1
311bp
 hypothetical_protein_T12_4464_[Trichinella_patagoniensis]
FPKM:0.12 TPM:0.20
5433 A_BomoEE_comp1078930_c0_seq1
521bp
FPKM:0.33 TPM:0.57
5434 A_BomoEE_comp1078_c0_seq1
343bp
FPKM:0.29 TPM:0.50
5435 A_BomoEE_comp1078_c1_seq1
373bp
FPKM:0.24 TPM:0.42
5436 A_BomoEE_comp1079008_c0_seq1
373bp
FPKM:0.28 TPM:0.50
5437 A_BomoEE_comp1079044_c0_seq1
392bp
 hypothetical_protein_[Streptomyces_sulphureus]
FPKM:0.30 TPM:0.52
5438 A_BomoEE_comp1079055_c0_seq1
414bp
FPKM:0.24 TPM:0.41
5439 A_BomoEE_comp10790_c0_seq1
456bp
hypothetical_protein_HMPREF9577_01469_[Propionibacterium_acnes_HL110PA3]
FPKM:0.17 TPM:0.30
5440 A_BomoEE_comp10791_c0_seq1
417bp
FPKM:0.17 TPM:0.29
5441 A_BomoEE_comp1079279_c0_seq1
223bp
FPKM:1.00 TPM:1.75
5442 A_BomoEE_comp1079296_c0_seq1
254bp
 hypothetical_protein_[Flavobacterium_rivuli]
FPKM:0.29 TPM:0.50
5443 A_BomoEE_comp10792_c0_seq1
210bp
 PREDICTED:_zinc_finger_protein_208-like,_partial_[Gekko_japonicus]
FPKM:0.35 TPM:0.62
5444 A_BomoEE_comp1079300_c0_seq1
388bp
FPKM:0.34 TPM:0.59
5445 A_BomoEE_comp1079356_c0_seq1
344bp
FPKM:0.24 TPM:0.41
5446 A_BomoEE_comp107935_c0_seq1
1495bp
 PREDICTED:_uncharacterized_protein_LOC105381841_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:8.70 TPM:15.17
5447 A_BomoEE_comp107940_c0_seq1
680bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101736480_[Bombyx_mori]
FPKM:9.68 TPM:16.87
5448 A_BomoEE_comp1079421_c0_seq1
361bp
FPKM:0.35 TPM:0.60
5449 A_BomoEE_comp107951_c0_seq1
1212bp
 PREDICTED:_mitochondrial_ubiquitin_ligase_activator_of_nfkb_1-A_[Papilio_xuthus]
GO:0000266 P mitochondrial fission
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030308 P negative regulation of cell growth
GO:0031307 C integral component of mitochondrial outer membrane
GO:0042802 F identical protein binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 F metal ion binding
GO:0051646 P mitochondrion localization
FPKM:8.27 TPM:14.43
5450 A_BomoEE_comp107958_c0_seq1
522bp
 PREDICTED:_putative_uncharacterized_protein_DDB_G0271606_[Bombyx_mori]
FPKM:9.63 TPM:16.79
5451 A_BomoEE_comp10795_c0_seq1
215bp
FPKM:0.00 TPM:0.00
5452 A_BomoEE_comp1079619_c0_seq1
222bp
FPKM:0.29 TPM:0.51
5453 A_BomoEE_comp10796_c0_seq1
305bp
 hypothetical_protein_EMCG_03582_[Emmonsia_crescens_UAMH_3008]
FPKM:0.31 TPM:0.53
5454 A_BomoEE_comp1079720_c0_seq1
241bp
FPKM:0.22 TPM:0.39
5455 A_BomoEE_comp1079731_c0_seq1
379bp
FPKM:0.28 TPM:0.48
5456 A_BomoEE_comp1079736_c0_seq1
467bp
FPKM:0.30 TPM:0.53
5457 A_BomoEE_comp1079829_c0_seq1
210bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX43_[Acyrthosiphon_pisum]
FPKM:0.35 TPM:0.62
5458 A_BomoEE_comp1079879_c0_seq1
673bp
FPKM:0.23 TPM:0.39
5459 A_BomoEE_comp10798_c0_seq1
330bp
 PREDICTED:_chorion_class_high-cysteine_HCA_protein_12-like_[Bombyx_mori]
FPKM:0.10 TPM:0.18
5460 A_BomoEE_comp1079995_c0_seq1
494bp
FPKM:0.15 TPM:0.26
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