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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5341 A_BomoEE_comp107578_c0_seq1
2514bp
 PREDICTED:_josephin-2_[Amyelois_transitella]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008242 F omega peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
FPKM:4.45 TPM:7.77
5342 A_BomoEE_comp1075791_c0_seq1
474bp
 LPS_biosynthesis_protein_[Brevundimonas_subvibrioides]
FPKM:0.27 TPM:0.47
5343 A_BomoEE_comp1075842_c0_seq1
498bp
FPKM:0.30 TPM:0.52
5344 A_BomoEE_comp1075978_c0_seq1
660bp
FPKM:0.22 TPM:0.38
5345 A_BomoEE_comp1075986_c0_seq1
461bp
FPKM:0.23 TPM:0.39
5346 A_BomoEE_comp107602_c0_seq1
1238bp
 PREDICTED:_tyrosine-protein_phosphatase_69D_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004728 F obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0023014 P signal transduction
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
FPKM:5.25 TPM:9.15
5347 A_BomoEE_comp107604_c0_seq1
232bp
FPKM:6.29 TPM:10.97
5348 A_BomoEE_comp107615_c0_seq1
300bp
 hypothetical_protein_[Escherichia_coli]
FPKM:0.32 TPM:0.55
5349 A_BomoEE_comp1076173_c0_seq1
226bp
FPKM:0.27 TPM:0.48
5350 A_BomoEE_comp1076183_c0_seq1
270bp
FPKM:0.25 TPM:0.43
5351 A_BomoEE_comp1076197_c0_seq1
461bp
FPKM:0.28 TPM:0.49
5352 A_BomoEE_comp10761_c0_seq1
1021bp
 PREDICTED:_kelch-like_protein_10_[Amyelois_transitella]
GO:0000902 P cell morphogenesis
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0008584 P male gonad development
GO:0009566 P fertilization
GO:0016567 P protein ubiquitination
GO:0030154 P cell differentiation
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0048808 P male genitalia morphogenesis
GO:0048873 P homeostasis of number of cells within a tissue
FPKM:0.23 TPM:0.40
5353 A_BomoEE_comp1076236_c0_seq1
218bp
FPKM:0.62 TPM:1.08
5354 A_BomoEE_comp1076258_c0_seq1
504bp
FPKM:0.32 TPM:0.55
5355 A_BomoEE_comp1076266_c0_seq1
364bp
 PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]
FPKM:0.25 TPM:0.44
5356 A_BomoEE_comp1076289_c0_seq1
911bp
FPKM:0.21 TPM:0.36
5357 A_BomoEE_comp1076343_c0_seq1
701bp
FPKM:0.24 TPM:0.43
5358 A_BomoEE_comp1076344_c0_seq1
218bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.15 TPM:0.27
5359 A_BomoEE_comp1076348_c0_seq1
391bp
FPKM:0.15 TPM:0.26
5360 A_BomoEE_comp1076365_c0_seq1
355bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.31 TPM:0.54
5361 A_BomoEE_comp1076375_c0_seq1
373bp
 hypothetical_protein_[Algoriphagus_sp._NH1]
FPKM:0.37 TPM:0.64
5362 A_BomoEE_comp10763_c0_seq1
363bp
 DegT/DnrJ/EryC1/StrS_aminotransferase_[uncultured_marine_group_II/III_euryarchaeote_KM3_146_G03]
FPKM:0.34 TPM:0.60
5363 A_BomoEE_comp1076409_c0_seq1
604bp
FPKM:0.21 TPM:0.36
5364 A_BomoEE_comp1076419_c0_seq1
215bp
 hypothetical_protein_VIGAN_05240700_[Vigna_angularis_var._angularis]
FPKM:0.49 TPM:0.85
5365 A_BomoEE_comp1076475_c0_seq1
238bp
FPKM:0.35 TPM:0.61
5366 A_BomoEE_comp1076491_c0_seq1
204bp
FPKM:0.20 TPM:0.34
5367 A_BomoEE_comp1076518_c0_seq1
231bp
 PREDICTED:_condensin_complex_subunit_1_[Fopius_arisanus]
FPKM:0.13 TPM:0.22
5368 A_BomoEE_comp1076534_c0_seq1
224bp
FPKM:0.85 TPM:1.47
5369 A_BomoEE_comp1076623_c0_seq1
201bp
FPKM:0.42 TPM:0.73
5370 A_BomoEE_comp1076625_c0_seq1
950bp
FPKM:0.23 TPM:0.40
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