SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/221677
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5281 A_BomoEE_comp1073885_c0_seq1
366bp
FPKM:0.25 TPM:0.44
5282 A_BomoEE_comp1073894_c0_seq1
296bp
FPKM:0.46 TPM:0.80
5283 A_BomoEE_comp10738_c0_seq1
874bp
FPKM:0.31 TPM:0.54
5284 A_BomoEE_comp1073902_c0_seq1
254bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:0.19 TPM:0.34
5285 A_BomoEE_comp1073927_c0_seq1
246bp
FPKM:0.11 TPM:0.18
5286 A_BomoEE_comp1073928_c0_seq1
979bp
FPKM:0.15 TPM:0.26
5287 A_BomoEE_comp107394_c0_seq1
210bp
 LysR_family_transcriptional_regulator_[Lactobacillus_selangorensis]
FPKM:0.00 TPM:0.00
5288 A_BomoEE_comp1073972_c0_seq1
202bp
 Pc16g09270_[Penicillium_rubens_Wisconsin_54-1255]
FPKM:0.00 TPM:0.00
5289 A_BomoEE_comp10739_c0_seq1
240bp
FPKM:0.23 TPM:0.40
5290 A_BomoEE_comp1073_c0_seq1
237bp
FPKM:0.47 TPM:0.82
5291 A_BomoEE_comp1074015_c0_seq1
298bp
FPKM:0.32 TPM:0.56
5292 A_BomoEE_comp1074036_c0_seq1
311bp
FPKM:0.23 TPM:0.41
5293 A_BomoEE_comp1074069_c0_seq1
207bp
 RNA_polymerase_sigma-70,_partial_[Cynara_cardunculus_var._scolymus]
FPKM:0.56 TPM:0.97
5294 A_BomoEE_comp1074089_c0_seq1
365bp
FPKM:0.21 TPM:0.37
5295 A_BomoEE_comp1074143_c0_seq1
553bp
FPKM:0.23 TPM:0.41
5296 A_BomoEE_comp107419_c0_seq1
1040bp
 PREDICTED:_monocyte_to_macrophage_differentiation_factor_isoform_X1_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0004672 F protein kinase activity
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019835 P cytolysis
GO:0032880 P regulation of protein localization
GO:0045666 P positive regulation of neuron differentiation
GO:0045860 P positive regulation of protein kinase activity
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0048471 C perinuclear region of cytoplasm
FPKM:8.69 TPM:15.16
5297 A_BomoEE_comp10741_c0_seq1
438bp
FPKM:0.15 TPM:0.27
5298 A_BomoEE_comp1074217_c0_seq1
268bp
FPKM:0.50 TPM:0.87
5299 A_BomoEE_comp1074256_c0_seq1
383bp
 putative_fungal_specific_transcription_factor_domain-containing_protein_[Rosellinia_necatrix]
FPKM:0.23 TPM:0.40
5300 A_BomoEE_comp10742_c0_seq1
396bp
FPKM:0.33 TPM:0.57
5301 A_BomoEE_comp1074303_c0_seq1
364bp
 hypothetical_protein_M427DRAFT_69848_[Gonapodya_prolifera_JEL478]
FPKM:0.21 TPM:0.37
5302 A_BomoEE_comp1074342_c0_seq1
560bp
FPKM:0.21 TPM:0.36
5303 A_BomoEE_comp1074344_c0_seq1
619bp
FPKM:0.25 TPM:0.44
5304 A_BomoEE_comp1074389_c0_seq1
485bp
FPKM:0.31 TPM:0.54
5305 A_BomoEE_comp1074434_c0_seq1
208bp
 PREDICTED:_growth_arrest-specific_protein_8_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0030317 P flagellated sperm motility
GO:0031514 C motile cilium
GO:0042995 C cell projection
GO:0048870 P cell motility
FPKM:0.18 TPM:0.32
5306 A_BomoEE_comp1074455_c0_seq1
334bp
 PREDICTED:_interleukin-4_receptor_subunit_alpha_[Thamnophis_sirtalis]
FPKM:0.30 TPM:0.53
5307 A_BomoEE_comp1074483_c0_seq1
322bp
 hypothetical_protein_[Methanosarcina_sp._MTP4]
FPKM:0.27 TPM:0.47
5308 A_BomoEE_comp1074591_c0_seq1
368bp
 PREDICTED:_sushi,_von_Willebrand_factor_type_A,_EGF_and_pentraxin_domain-containing_protein_1-like_[Priapulus_caudatus]
FPKM:0.29 TPM:0.51
5309 A_BomoEE_comp1074658_c0_seq1
210bp
FPKM:0.00 TPM:0.00
5310 A_BomoEE_comp10746_c0_seq1
1022bp
FPKM:0.20 TPM:0.35
previous next from show/221677

- SilkBase 1999-2023 -