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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4921 A_BomoEE_comp1063935_c0_seq1
424bp
FPKM:0.23 TPM:0.39
4922 A_BomoEE_comp1063938_c0_seq1
378bp
 hypothetical_protein_[Bacillus_butanolivorans]
FPKM:0.20 TPM:0.35
4923 A_BomoEE_comp1063945_c0_seq1
499bp
FPKM:0.12 TPM:0.22
4924 A_BomoEE_comp1063996_c0_seq1
573bp
FPKM:0.14 TPM:0.25
4925 A_BomoEE_comp1063_c0_seq1
248bp
 hypothetical_protein_UT63_C0046G0001,_partial_[Candidatus_Gottesmanbacteria_bacterium_GW2011_GWC2_39_8]
FPKM:0.21 TPM:0.36
4926 A_BomoEE_comp1064050_c0_seq1
384bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_little_elongation_complex_subunit_1_[Columba_livia]
FPKM:0.31 TPM:0.54
4927 A_BomoEE_comp1064051_c0_seq1
347bp
FPKM:0.16 TPM:0.27
4928 A_BomoEE_comp1064065_c0_seq1
408bp
 hypothetical_protein_KU37_09110_[Sulfuricurvum_sp._PC08-66]
FPKM:0.35 TPM:0.60
4929 A_BomoEE_comp1064095_c0_seq1
357bp
 hypothetical_protein_[Ferrimicrobium_acidiphilum]
FPKM:0.31 TPM:0.54
4930 A_BomoEE_comp1064122_c0_seq1
203bp
 PREDICTED:_leucine-rich_repeat-containing_protein_9-like_[Tinamus_guttatus]
FPKM:0.20 TPM:0.35
4931 A_BomoEE_comp1064127_c0_seq1
323bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.11 TPM:0.19
4932 A_BomoEE_comp106413_c0_seq1
898bp
FPKM:7.42 TPM:12.95
4933 A_BomoEE_comp1064181_c0_seq1
350bp
 PREDICTED:_izumo_sperm-egg_fusion_protein_1_isoform_X2_[Equus_przewalskii]
FPKM:0.23 TPM:0.40
4934 A_BomoEE_comp1064187_c0_seq1
441bp
FPKM:0.39 TPM:0.69
4935 A_BomoEE_comp1064194_c0_seq1
267bp
FPKM:0.25 TPM:0.44
4936 A_BomoEE_comp1064199_c0_seq1
575bp
FPKM:0.24 TPM:0.42
4937 A_BomoEE_comp10641_c0_seq1
718bp
 hypothetical_protein_AB675_1833_[Phialophora_attae]
FPKM:0.36 TPM:0.62
4938 A_BomoEE_comp1064223_c0_seq1
756bp
FPKM:0.29 TPM:0.51
4939 A_BomoEE_comp1064235_c0_seq1
405bp
FPKM:0.14 TPM:0.24
4940 A_BomoEE_comp1064236_c0_seq1
687bp
 PREDICTED:_lysosomal_alpha-mannosidase-like_[Bombyx_mori]
FPKM:0.27 TPM:0.47
4941 A_BomoEE_comp1064284_c0_seq1
264bp
 putative_integral_membrane_protein_[gamma_proteobacterium_IMCC2047]
FPKM:0.26 TPM:0.45
4942 A_BomoEE_comp1064335_c0_seq1
272bp
 hypothetical_protein_RR48_09437_[Papilio_machaon]
FPKM:0.48 TPM:0.84
4943 A_BomoEE_comp1064373_c0_seq1
359bp
 PREDICTED:_uncharacterized_protein_LOC106713896,_partial_[Papilio_machaon]
FPKM:0.31 TPM:0.53
4944 A_BomoEE_comp1064382_c0_seq1
263bp
FPKM:0.09 TPM:0.15
4945 A_BomoEE_comp1064411_c0_seq1
243bp
FPKM:0.55 TPM:0.95
4946 A_BomoEE_comp1064412_c0_seq1
213bp
FPKM:0.00 TPM:0.00
4947 A_BomoEE_comp1064449_c0_seq1
342bp
 1917335A_mariner_1_element
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.19 TPM:0.33
4948 A_BomoEE_comp1064452_c0_seq1
383bp
FPKM:0.31 TPM:0.54
4949 A_BomoEE_comp1064462_c0_seq1
265bp
FPKM:0.09 TPM:0.15
4950 A_BomoEE_comp1064464_c0_seq1
309bp
FPKM:0.24 TPM:0.41
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