SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/221677
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4321 A_BomoEE_comp105099_c0_seq1
7511bp
 PREDICTED:_protein_sax-3-like_[Bombyx_mori]
GO:0001656 P metanephros development
GO:0001657 P ureteric bud development
GO:0001822 P kidney development
GO:0005515 F protein binding
GO:0006935 P chemotaxis
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008046 F axon guidance receptor activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016199 P axon midline choice point recognition
GO:0021891 P olfactory bulb interneuron development
GO:0030154 P cell differentiation
GO:0030673 C axolemma
GO:0031290 P retinal ganglion cell axon guidance
GO:0032870 P cellular response to hormone stimulus
GO:0035385 P Roundabout signaling pathway
GO:0042802 F identical protein binding
GO:0050772 P positive regulation of axonogenesis
GO:0050925 P negative regulation of negative chemotaxis
GO:0051964 P negative regulation of synapse assembly
GO:0061364 P apoptotic process involved in luteolysis
GO:0070062 C extracellular exosome
FPKM:4.26 TPM:7.44
4322 A_BomoEE_comp1050_c0_seq1
241bp
FPKM:0.11 TPM:0.20
4323 A_BomoEE_comp1051001_c0_seq1
249bp
FPKM:0.61 TPM:1.07
4324 A_BomoEE_comp1051003_c0_seq1
346bp
FPKM:0.19 TPM:0.33
4325 A_BomoEE_comp1051065_c0_seq1
736bp
FPKM:0.24 TPM:0.43
4326 A_BomoEE_comp1051084_c0_seq1
525bp
FPKM:0.14 TPM:0.24
4327 A_BomoEE_comp1051112_c0_seq1
429bp
FPKM:0.29 TPM:0.50
4328 A_BomoEE_comp1051128_c0_seq1
333bp
FPKM:0.46 TPM:0.80
4329 A_BomoEE_comp1051144_c0_seq1
224bp
MULTISPECIES:_universal_stress_protein_A_[Propionibacterium]
FPKM:0.70 TPM:1.23
4330 A_BomoEE_comp1051166_c0_seq1
267bp
FPKM:0.42 TPM:0.73
4331 A_BomoEE_comp1051167_c0_seq1
396bp
 MULTISPECIES:_hypothetical_protein_[Bacillus_subtilis_group]
FPKM:0.15 TPM:0.25
4332 A_BomoEE_comp1051178_c0_seq1
395bp
 hypothetical_protein_TGAM01_09597_[Trichoderma_gamsii]
FPKM:0.22 TPM:0.38
4333 A_BomoEE_comp1051186_c0_seq1
249bp
FPKM:0.00 TPM:0.00
4334 A_BomoEE_comp1051196_c0_seq1
292bp
FPKM:0.20 TPM:0.35
4335 A_BomoEE_comp1051197_c0_seq1
435bp
 PREDICTED:_enteropeptidase_isoform_X2_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007613 P memory
GO:0008219 P cell death
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009611 P response to wounding
GO:0016787 F hydrolase activity
GO:0031642 P negative regulation of myelination
GO:0043616 P keratinocyte proliferation
GO:0048681 P negative regulation of axon regeneration
GO:0048812 P neuron projection morphogenesis
GO:0050807 P regulation of synapse organization
GO:0050808 P synapse organization
FPKM:0.31 TPM:0.54
4336 A_BomoEE_comp1051225_c0_seq1
392bp
FPKM:0.30 TPM:0.52
4337 A_BomoEE_comp1051275_c0_seq1
497bp
FPKM:0.30 TPM:0.52
4338 A_BomoEE_comp1051327_c0_seq1
676bp
FPKM:0.24 TPM:0.42
4339 A_BomoEE_comp1051335_c0_seq1
219bp
 cyclin_I_family,_member_2_[Alligator_mississippiensis]
FPKM:0.61 TPM:1.06
4340 A_BomoEE_comp1051338_c0_seq1
935bp
FPKM:0.29 TPM:0.50
4341 A_BomoEE_comp1051387_c0_seq1
270bp
FPKM:0.41 TPM:0.71
4342 A_BomoEE_comp1051393_c0_seq1
363bp
FPKM:0.34 TPM:0.60
4343 A_BomoEE_comp10513_c0_seq1
502bp
FPKM:0.20 TPM:0.34
4344 A_BomoEE_comp1051404_c0_seq1
203bp
 PREDICTED:_GTPase_RhebL1_[Stegastes_partitus]
FPKM:0.00 TPM:0.00
4345 A_BomoEE_comp1051419_c0_seq1
453bp
FPKM:0.23 TPM:0.40
4346 A_BomoEE_comp1051437_c0_seq1
711bp
FPKM:0.21 TPM:0.37
4347 A_BomoEE_comp1051467_c0_seq1
569bp
FPKM:0.18 TPM:0.32
4348 A_BomoEE_comp1051471_c0_seq1
321bp
FPKM:0.33 TPM:0.57
4349 A_BomoEE_comp1051473_c0_seq1
435bp
 hypothetical_protein_PPTG_20721_[Phytophthora_parasitica_INRA-310]
FPKM:0.28 TPM:0.49
4350 A_BomoEE_comp1051482_c0_seq1
245bp
 hypothetical_protein_CPS_2246_[Colwellia_psychrerythraea_34H]
FPKM:0.11 TPM:0.19
previous next from show/221677

- SilkBase 1999-2023 -