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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3841 A_BomoEE_comp104105_c0_seq1
959bp
FPKM:6.05 TPM:10.54
3842 A_BomoEE_comp1041067_c0_seq1
262bp
FPKM:0.18 TPM:0.31
3843 A_BomoEE_comp10410_c0_seq1
519bp
FPKM:0.37 TPM:0.65
3844 A_BomoEE_comp1041105_c0_seq1
353bp
 PREDICTED:_uncharacterized_protein_LOC105842553_[Bombyx_mori]
FPKM:0.45 TPM:0.79
3845 A_BomoEE_comp1041160_c0_seq1
215bp
FPKM:0.32 TPM:0.57
3846 A_BomoEE_comp104119_c0_seq1
1235bp
FPKM:5.77 TPM:10.06
3847 A_BomoEE_comp10411_c0_seq1
228bp
 hypothetical_protein_BRAFLDRAFT_279789_[Branchiostoma_floridae]
FPKM:0.13 TPM:0.23
3848 A_BomoEE_comp1041237_c0_seq1
256bp
FPKM:0.09 TPM:0.16
3849 A_BomoEE_comp1041243_c0_seq1
247bp
FPKM:0.42 TPM:0.73
3850 A_BomoEE_comp1041244_c0_seq1
480bp
FPKM:0.21 TPM:0.37
3851 A_BomoEE_comp1041266_c0_seq1
735bp
FPKM:0.29 TPM:0.50
3852 A_BomoEE_comp1041275_c0_seq1
448bp
FPKM:0.24 TPM:0.41
3853 A_BomoEE_comp1041283_c0_seq1
454bp
FPKM:0.38 TPM:0.65
3854 A_BomoEE_comp1041296_c0_seq1
257bp
 cytochrome_c_oxidase_subunit_II_[Legionella_massiliensis]
FPKM:0.09 TPM:0.16
3855 A_BomoEE_comp1041304_c0_seq1
291bp
FPKM:0.34 TPM:0.59
3856 A_BomoEE_comp1041359_c0_seq1
474bp
FPKM:0.30 TPM:0.52
3857 A_BomoEE_comp1041368_c0_seq1
384bp
FPKM:0.27 TPM:0.47
3858 A_BomoEE_comp1041392_c0_seq1
300bp
FPKM:0.19 TPM:0.33
3859 A_BomoEE_comp1041396_c0_seq1
263bp
FPKM:0.26 TPM:0.46
3860 A_BomoEE_comp1041397_c0_seq1
331bp
FPKM:0.36 TPM:0.63
3861 A_BomoEE_comp10413_c0_seq1
433bp
 polyketide_cyclase_[Streptomyces_phaeochromogenes]
FPKM:0.41 TPM:0.71
3862 A_BomoEE_comp1041441_c0_seq1
477bp
FPKM:0.27 TPM:0.46
3863 A_BomoEE_comp10414_c0_seq1
856bp
FPKM:0.22 TPM:0.39
3864 A_BomoEE_comp1041500_c0_seq1
562bp
FPKM:0.33 TPM:0.58
3865 A_BomoEE_comp1041526_c0_seq1
539bp
FPKM:0.22 TPM:0.39
3866 A_BomoEE_comp104153_c0_seq1
235bp
FPKM:2.06 TPM:3.58
3867 A_BomoEE_comp1041573_c0_seq1
211bp
FPKM:0.00 TPM:0.00
3868 A_BomoEE_comp1041575_c0_seq1
378bp
FPKM:0.40 TPM:0.69
3869 A_BomoEE_comp1041583_c0_seq1
295bp
 Histone-lysine_N-methyltransferase_SETMAR_[Acromyrmex_echinatior]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.33 TPM:0.58
3870 A_BomoEE_comp1041585_c0_seq1
264bp
FPKM:0.43 TPM:0.76
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