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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3571 A_BomoEE_comp1036279_c0_seq1
300bp
FPKM:0.44 TPM:0.77
3572 A_BomoEE_comp1036280_c0_seq1
788bp
FPKM:0.28 TPM:0.48
3573 A_BomoEE_comp1036282_c0_seq1
215bp
 tRNA_(adenosine(37)-N6)-dimethylallyltransferase_MiaA_[Muricauda_ruestringensis]
FPKM:0.49 TPM:0.85
3574 A_BomoEE_comp1036315_c0_seq1
464bp
 PREDICTED:_uncharacterized_protein_LOC105387858_isoform_X2_[Plutella_xylostella]
FPKM:0.17 TPM:0.29
3575 A_BomoEE_comp1036327_c0_seq1
607bp
FPKM:0.24 TPM:0.42
3576 A_BomoEE_comp1036328_c0_seq1
633bp
FPKM:0.30 TPM:0.52
3577 A_BomoEE_comp1036340_c0_seq1
243bp
FPKM:0.66 TPM:1.14
3578 A_BomoEE_comp1036347_c0_seq1
216bp
 glycosyl_transferase_[Paenibacillus_polymyxa]
FPKM:0.64 TPM:1.11
3579 A_BomoEE_comp1036397_c0_seq1
230bp
FPKM:0.26 TPM:0.45
3580 A_BomoEE_comp10363_c0_seq1
304bp
 transposase_[Antheraea_yamamai]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.37 TPM:0.64
3581 A_BomoEE_comp1036465_c0_seq1
937bp
 dynein_light_chain_Tctex-type,_putative_[Pediculus_humanus_corporis]
FPKM:0.21 TPM:0.37
3582 A_BomoEE_comp1036480_c0_seq1
213bp
FPKM:0.67 TPM:1.17
3583 A_BomoEE_comp1036484_c0_seq1
370bp
FPKM:0.33 TPM:0.57
3584 A_BomoEE_comp1036495_c0_seq1
279bp
FPKM:0.45 TPM:0.79
3585 A_BomoEE_comp103651_c0_seq1
1680bp
 PREDICTED:_homer_protein_homolog_2_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007216 P G protein-coupled glutamate receptor signaling pathway
GO:0007605 P sensory perception of sound
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0032420 C stereocilium
GO:0032426 C stereocilium tip
GO:0035254 F glutamate receptor binding
GO:0035256 F G protein-coupled glutamate receptor binding
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046982 F protein heterodimerization activity
FPKM:5.89 TPM:10.27
3586 A_BomoEE_comp1036521_c0_seq1
502bp
 hypothetical_protein_[Virgibacillus_sp._SK37]
FPKM:0.20 TPM:0.34
3587 A_BomoEE_comp1036524_c0_seq1
301bp
FPKM:0.13 TPM:0.22
3588 A_BomoEE_comp1036531_c0_seq1
733bp
FPKM:0.30 TPM:0.53
3589 A_BomoEE_comp1036548_c0_seq1
466bp
 conserved_hypothetical_protein_[Verticillium_alfalfae_VaMs.102]
FPKM:0.25 TPM:0.43
3590 A_BomoEE_comp1036552_c0_seq1
269bp
FPKM:0.17 TPM:0.29
3591 A_BomoEE_comp1036570_c0_seq1
370bp
 hypothetical_protein_[Desulfatirhabdium_butyrativorans]
FPKM:0.21 TPM:0.36
3592 A_BomoEE_comp1036589_c0_seq1
477bp
 PREDICTED:_sodium-dependent_nutrient_amino_acid_transporter_1-like_isoform_X1_[Amyelois_transitella]
GO:0005328 F neurotransmitter:sodium symporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005330 F dopamine:sodium symporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0015293 F symporter activity
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043005 C neuron projection
GO:0046872 F metal ion binding
GO:0051583 P dopamine uptake involved in synaptic transmission
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:0098793 C presynapse
FPKM:0.35 TPM:0.60
3593 A_BomoEE_comp1036616_c0_seq1
400bp
FPKM:0.21 TPM:0.37
3594 A_BomoEE_comp1036618_c0_seq1
465bp
FPKM:0.28 TPM:0.48
3595 A_BomoEE_comp1036623_c0_seq1
260bp
 PREDICTED:_snRNA-activating_protein_complex_subunit-like_isoform_X1_[Cucumis_melo]
FPKM:0.09 TPM:0.16
3596 A_BomoEE_comp1036641_c0_seq1
914bp
 PREDICTED:_serine_protease-like_protein_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007586 P digestion
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:0.23 TPM:0.40
3597 A_BomoEE_comp1036653_c0_seq1
651bp
FPKM:0.10 TPM:0.18
3598 A_BomoEE_comp103665_c0_seq1
615bp
FPKM:7.34 TPM:12.80
3599 A_BomoEE_comp1036676_c0_seq1
954bp
 hypothetical_protein_[Altererythrobacter_sp._Root672]
FPKM:0.23 TPM:0.40
3600 A_BomoEE_comp1036705_c0_seq1
211bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.17 TPM:0.30
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