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Last updated: 2022/11/18

Search Assembled RNA-Seq

next from show/221677
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1 A_BomoEE_comp0_c0_seq1
442bp
 PREDICTED:_sperm-associated_acrosin_inhibitor-like_isoform_X1_[Bubalus_bubalis]
FPKM:0.24 TPM:0.42
2 A_BomoEE_comp10000_c0_seq1
346bp
 cytochrome_P450_[Auricularia_subglabra_TFB-10046_SS5]
FPKM:0.05 TPM:0.08
3 A_BomoEE_comp100017_c0_seq1
1032bp
 PREDICTED:_protein_cramped_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
FPKM:11.22 TPM:19.57
4 A_BomoEE_comp1000183_c0_seq1
612bp
FPKM:0.35 TPM:0.61
5 A_BomoEE_comp1000194_c0_seq1
515bp
FPKM:0.28 TPM:0.50
6 A_BomoEE_comp1000196_c0_seq1
391bp
FPKM:0.30 TPM:0.52
7 A_BomoEE_comp10001_c0_seq1
238bp
 PREDICTED:_uncharacterized_protein_LOC105793279_[Gossypium_raimondii]
FPKM:0.12 TPM:0.20
8 A_BomoEE_comp1000201_c0_seq1
274bp
 Heterogeneous_nuclear_ribonucleoprotein_Q_[Papilio_xuthus]
FPKM:0.32 TPM:0.55
9 A_BomoEE_comp1000319_c0_seq1
305bp
FPKM:0.37 TPM:0.64
10 A_BomoEE_comp1000325_c0_seq1
520bp
FPKM:0.42 TPM:0.73
11 A_BomoEE_comp1000344_c0_seq1
328bp
FPKM:0.37 TPM:0.64
12 A_BomoEE_comp100034_c0_seq1
1667bp
 PREDICTED:_SH3_domain-containing_protein_19_isoform_X1_[Papilio_xuthus]
GO:0005515 F protein binding
FPKM:10.05 TPM:17.52
13 A_BomoEE_comp100044_c0_seq1
755bp
FPKM:6.08 TPM:10.60
14 A_BomoEE_comp1000477_c0_seq1
237bp
FPKM:0.47 TPM:0.82
15 A_BomoEE_comp10004_c0_seq1
264bp
 unnamed_protein_product_[Cryptosporidium_hominis]
FPKM:0.35 TPM:0.61
16 A_BomoEE_comp10005_c0_seq1
307bp
FPKM:0.48 TPM:0.84
17 A_BomoEE_comp1000672_c0_seq1
390bp
FPKM:0.19 TPM:0.33
18 A_BomoEE_comp1000698_c0_seq1
481bp
FPKM:0.32 TPM:0.55
19 A_BomoEE_comp10006_c0_seq1
256bp
FPKM:0.57 TPM:0.99
20 A_BomoEE_comp1000719_c0_seq1
629bp
 PREDICTED:_alpha-(1,3)-fucosyltransferase_7-like_[Bombyx_mori]
FPKM:0.14 TPM:0.25
21 A_BomoEE_comp1000784_c0_seq1
268bp
FPKM:0.33 TPM:0.58
22 A_BomoEE_comp1000830_c0_seq1
601bp
FPKM:0.19 TPM:0.33
23 A_BomoEE_comp10008_c0_seq1
354bp
FPKM:0.31 TPM:0.55
24 A_BomoEE_comp1000923_c0_seq1
303bp
 Histone-lysine_N-methyltransferase_SETMAR,_partial_[Habropoda_laboriosa]
FPKM:0.12 TPM:0.22
25 A_BomoEE_comp100092_c0_seq1
1911bp
 PREDICTED:_MAP7_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]
FPKM:8.84 TPM:15.42
26 A_BomoEE_comp1000964_c0_seq1
361bp
FPKM:0.39 TPM:0.68
27 A_BomoEE_comp10009_c0_seq1
315bp
methylated-DNA--protein-cysteine_methyltransferase_[Propionibacterium_acnes]
GO:0003684 F damaged DNA binding
GO:0003824 F catalytic activity
GO:0003908 F methylated-DNA-[protein]-cysteine S-methyltransferase activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006307 P DNA dealkylation involved in DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0051409 P response to nitrosative stress
FPKM:0.28 TPM:0.50
28 A_BomoEE_comp1001012_c0_seq1
221bp
FPKM:0.15 TPM:0.26
29 A_BomoEE_comp1001038_c0_seq1
644bp
FPKM:0.27 TPM:0.48
30 A_BomoEE_comp1001105_c0_seq1
445bp
FPKM:0.33 TPM:0.57
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