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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5941 A_BomaMG_comp15701_c0_seq1
400bp
olfactory_receptor_[Bombyx_mori]
FPKM:1.71 TPM:1.58
5942 A_BomaMG_comp15701_c1_seq1
370bp
FPKM:1.62 TPM:1.50
5943 A_BomaMG_comp15702_c0_seq1
607bp
pleiotrophin-like_protein_precursor_[Bombyx_mori]
FPKM:2.31 TPM:2.14
5944 A_BomaMG_comp15703_c0_seq1
361bp
PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:2.83 TPM:2.62
5945 A_BomaMG_comp15703_c1_seq1
321bp
PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:4.35 TPM:4.03
5946 A_BomaMG_comp15704_c0_seq1
390bp
PREDICTED:_LOW_QUALITY_PROTEIN:_ribonuclease_3_[Papilio_machaon]
FPKM:1.46 TPM:1.35
5947 A_BomaMG_comp157050_c0_seq1
467bp
FPKM:1.43 TPM:1.32
5948 A_BomaMG_comp15705_c0_seq1
1050bp
PREDICTED:_MICAL-like_protein_1_isoform_X2_[Bombyx_mori]
FPKM:12.08 TPM:11.18
5949 A_BomaMG_comp15706_c0_seq1
266bp
PREDICTED:_monoacylglycerol_lipase_ABHD12_[Vicugna_pacos]
FPKM:1.16 TPM:1.08
5950 A_BomaMG_comp15706_c1_seq1
357bp
FPKM:1.74 TPM:1.61
5951 A_BomaMG_comp15707_c0_seq1
201bp
FPKM:2.11 TPM:1.96
5952 A_BomaMG_comp15708_c0_seq1
274bp
reverse_transcriptase_[Bombyx_mori]
FPKM:1.78 TPM:1.65
5953 A_BomaMG_comp15709_c0_seq1
263bp
FPKM:2.80 TPM:2.59
5954 A_BomaMG_comp15709_c1_seq1
463bp
PREDICTED:_U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]
FPKM:2.17 TPM:2.01
5955 A_BomaMG_comp15710_c0_seq1
768bp
hypothetical_protein_KGM_02495_[Danaus_plexippus]
GO:0001522 P pseudouridine synthesis
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008033 P tRNA processing
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
FPKM:1.50 TPM:1.39
5956 A_BomaMG_comp15711_c0_seq1
512bp
FLJ37770-like_protein,_partial_[Acromyrmex_echinatior]
FPKM:1.54 TPM:1.42
5957 A_BomaMG_comp15712_c0_seq1
205bp
MULTISPECIES:_RNase_adaptor_protein_RapZ_[Dorea]
FPKM:1.93 TPM:1.79
5958 A_BomaMG_comp15712_c1_seq1
411bp
FPKM:1.92 TPM:1.78
5959 A_BomaMG_comp15713_c0_seq1
299bp
hypothetical_protein_CTRG_03973_[Candida_tropicalis_MYA-3404]
FPKM:0.29 TPM:0.26
5960 A_BomaMG_comp15714_c0_seq1
318bp
hypothetical_protein_cypCar_00031897_[Cyprinus_carpio]
FPKM:2.22 TPM:2.06
5961 A_BomaMG_comp15715_c0_seq1
892bp
FPKM:1.57 TPM:1.46
5962 A_BomaMG_comp15716_c0_seq1
897bp
Phosphoinositide_3-kinase_regulatory_subunit_4_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005643 C nuclear pore
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006468 P protein phosphorylation
GO:0006623 P protein targeting to vacuole
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030242 P autophagy of peroxisome
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0032801 P receptor catabolic process
GO:0034162 P toll-like receptor 9 signaling pathway
GO:0034271 C phosphatidylinositol 3-kinase complex, class III, type I
GO:0034272 C phosphatidylinositol 3-kinase complex, class III, type II
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042149 P cellular response to glucose starvation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045324 P late endosome to vacuole transport
GO:0071561 C nucleus-vacuole junction
FPKM:2.27 TPM:2.10
5963 A_BomaMG_comp15716_c1_seq1
617bp
PREDICTED:_phosphoinositide_3-kinase_regulatory_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005643 C nuclear pore
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005930 C axoneme
GO:0006468 P protein phosphorylation
GO:0006623 P protein targeting to vacuole
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0032801 P receptor catabolic process
GO:0034271 C phosphatidylinositol 3-kinase complex, class III, type I
GO:0034272 C phosphatidylinositol 3-kinase complex, class III, type II
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0042149 P cellular response to glucose starvation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045324 P late endosome to vacuole transport
GO:0071561 C nucleus-vacuole junction
FPKM:1.87 TPM:1.73
5964 A_BomaMG_comp157175_c0_seq1
289bp
FPKM:2.79 TPM:2.58
5965 A_BomaMG_comp15717_c0_seq1
2115bp
PREDICTED:_uncharacterized_protein_LOC101745877_isoform_X1_[Bombyx_mori]
FPKM:2.03 TPM:1.88
5966 A_BomaMG_comp15720_c0_seq1
514bp
PREDICTED:_UPF0183_protein_CG7083_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.13 TPM:1.97
5967 A_BomaMG_comp15720_c1_seq1
205bp
PREDICTED:_UPF0183_protein_CG7083_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
5968 A_BomaMG_comp15721_c0_seq1
318bp
FPKM:1.48 TPM:1.37
5969 A_BomaMG_comp15721_c1_seq1
1309bp
PREDICTED:_zinc_finger_protein_Xfin-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
5970 A_BomaMG_comp15721_c1_seq2
1309bp
PREDICTED:_zinc_finger_protein_Xfin-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.28 TPM:2.11
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