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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5851 A_BomaMG_comp15612_c0_seq1
390bp
FPKM:2.28 TPM:2.11
5852 A_BomaMG_comp15613_c0_seq1
1256bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Amyelois_transitella]
GO:0000281 P mitotic cytokinesis
GO:0001669 C acrosomal vesicle
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0007265 P Ras protein signal transduction
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019897 C extrinsic component of plasma membrane
GO:0030496 C midbody
GO:0031313 C extrinsic component of endosome membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
FPKM:3.18 TPM:2.95
5853 A_BomaMG_comp156151_c0_seq1
315bp
PREDICTED:_transcription_initiation_factor_TFIID_subunit_7_[Plutella_xylostella]
FPKM:3.53 TPM:3.27
5854 A_BomaMG_comp15615_c0_seq1
666bp
PREDICTED:_condensin-2_complex_subunit_D3-like_[Amyelois_transitella]
GO:0000779 C condensed chromosome, centromeric region
GO:0000793 C condensed chromosome
GO:0000799 C condensin complex
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0010032 P meiotic chromosome condensation
GO:0016020 C membrane
GO:0030261 P chromosome condensation
GO:0031618 C pericentric heterochromatin
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042585 C germinal vesicle
GO:0051301 P cell division
GO:0051304 P chromosome separation
FPKM:1.96 TPM:1.81
5855 A_BomaMG_comp15615_c1_seq1
285bp
PREDICTED:_condensin-2_complex_subunit_D3-like_[Amyelois_transitella]
FPKM:2.25 TPM:2.08
5856 A_BomaMG_comp15616_c0_seq1
951bp
PREDICTED:_MAGUK_p55_subfamily_member_6_[Bombyx_mori]
GO:0004385 F guanylate kinase activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030165 F PDZ domain binding
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
GO:0070062 C extracellular exosome
FPKM:1.89 TPM:1.75
5857 A_BomaMG_comp15617_c0_seq1
227bp
reverse_transcriptase_[Bombyx_mori]
FPKM:1.93 TPM:1.79
5858 A_BomaMG_comp15617_c1_seq1
244bp
hypothetical_protein_[Piscirickettsia_salmonis]
FPKM:0.00 TPM:0.00
5859 A_BomaMG_comp15619_c0_seq1
794bp
PREDICTED:_microtubule-associated_serine/threonine-protein_kinase_3_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0007010 P cytoskeleton organization
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0035556 P intracellular signal transduction
FPKM:1.99 TPM:1.84
5860 A_BomaMG_comp15622_c0_seq1
486bp
FPKM:2.34 TPM:2.17
5861 A_BomaMG_comp15624_c0_seq1
708bp
FPKM:2.51 TPM:2.32
5862 A_BomaMG_comp15625_c0_seq1
202bp
FPKM:5.16 TPM:4.78
5863 A_BomaMG_comp15626_c0_seq1
513bp
FPKM:1.74 TPM:1.61
5864 A_BomaMG_comp15626_c1_seq1
238bp
olfactory_receptor_[Bombyx_mori]
FPKM:0.55 TPM:0.51
5865 A_BomaMG_comp15628_c0_seq1
1240bp
MULTISPECIES:_dTDP-6-deoxy-3,4-keto-hexulose_isomerase_[Elizabethkingia]
FPKM:1.79 TPM:1.66
5866 A_BomaMG_comp1562_c0_seq1
251bp
microcystin-dependent_protein_[Rheinheimera_sp._A13L]
FPKM:0.46 TPM:0.43
5867 A_BomaMG_comp15630_c0_seq1
1268bp
PREDICTED:_telomerase-binding_protein_EST1A_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000333 C telomerase catalytic core complex
GO:0000723 P telomere maintenance
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016787 F hydrolase activity
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0043021 F ribonucleoprotein complex binding
GO:0046872 F metal ion binding
GO:0070034 F telomerase RNA binding
GO:0070182 F DNA polymerase binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1904354 P negative regulation of telomere capping
FPKM:1.68 TPM:1.56
5868 A_BomaMG_comp15632_c0_seq1
2889bp
PREDICTED:_nuclear_valosin-containing_protein-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005697 C telomerase holoenzyme complex
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0051973 P positive regulation of telomerase activity
GO:1990275 F preribosome binding
FPKM:3.76 TPM:3.48
5869 A_BomaMG_comp15634_c0_seq1
328bp
hypothetical_protein_FAVG1_04181_[Fusarium_avenaceum]
FPKM:1.84 TPM:1.71
5870 A_BomaMG_comp15635_c0_seq1
372bp
PREDICTED:_uncharacterized_protein_LOC104279471,_partial_[Apaloderma_vittatum]
FPKM:1.60 TPM:1.48
5871 A_BomaMG_comp15636_c0_seq1
288bp
hypothetical_protein_BN20_026_[Lactobacillus_phage_EV3]
FPKM:1.56 TPM:1.45
5872 A_BomaMG_comp15637_c0_seq1
461bp
g-protein_alpha_subunit_[Ancylostoma_duodenale]
FPKM:1.33 TPM:1.24
5873 A_BomaMG_comp15640_c0_seq1
312bp
2-oxoglutarate_dehydrogenase_E1_component_[Methylobacterium_sp._Leaf106]
FPKM:2.32 TPM:2.15
5874 A_BomaMG_comp15642_c0_seq1
227bp
hypothetical_protein_[Microbacterium_paraoxydans]
FPKM:0.00 TPM:0.00
5875 A_BomaMG_comp15643_c0_seq1
339bp
reverse_transcriptase,_partial_[Trilocha_sp._GAS-2011]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.93 TPM:1.79
5876 A_BomaMG_comp15645_c0_seq1
521bp
hypothetical_protein_[Tannerella_forsythia]
FPKM:1.90 TPM:1.76
5877 A_BomaMG_comp15646_c0_seq1
322bp
FPKM:2.40 TPM:2.22
5878 A_BomaMG_comp15646_c1_seq1
1071bp
FPKM:1.56 TPM:1.44
5879 A_BomaMG_comp15647_c0_seq1
284bp
PREDICTED:_amidophosphoribosyltransferase-like_isoform_X1_[Bombyx_mori]
GO:0004044 F amidophosphoribosyltransferase activity
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008340 P determination of adult lifespan
GO:0009113 P purine nucleobase biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0040016 P embryonic cleavage
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:4.22 TPM:3.90
5880 A_BomaMG_comp15648_c0_seq1
674bp
FPKM:1.86 TPM:1.72
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