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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5791 A_BomaMG_comp15556_c0_seq1
291bp
FPKM:1.83 TPM:1.69
5792 A_BomaMG_comp15557_c0_seq1
248bp
FPKM:1.91 TPM:1.77
5793 A_BomaMG_comp155584_c0_seq1
532bp
FPKM:1.45 TPM:1.34
5794 A_BomaMG_comp15559_c0_seq1
687bp
PREDICTED:_kinesin-related_protein_4_[Bombyx_mori]
FPKM:1.41 TPM:1.30
5795 A_BomaMG_comp15559_c1_seq1
450bp
PREDICTED:_kinesin-related_protein_4_[Bombyx_mori]
FPKM:1.26 TPM:1.17
5796 A_BomaMG_comp15560_c0_seq1
389bp
FPKM:2.12 TPM:1.97
5797 A_BomaMG_comp15562_c0_seq1
598bp
FPKM:1.63 TPM:1.51
5798 A_BomaMG_comp15562_c1_seq1
615bp
FPKM:1.72 TPM:1.59
5799 A_BomaMG_comp155630_c0_seq1
661bp
FPKM:1.34 TPM:1.24
5800 A_BomaMG_comp15563_c0_seq1
783bp
PREDICTED:_mod(mdg4)-heS00531_isoform_X3_[Bombyx_mori]
FPKM:1.46 TPM:1.36
5801 A_BomaMG_comp15565_c0_seq1
312bp
PREDICTED:_uncharacterized_protein_LOC106713896,_partial_[Papilio_machaon]
FPKM:1.29 TPM:1.19
5802 A_BomaMG_comp155666_c0_seq1
433bp
hypothetical_protein_[Yellowstone_lake_phycodnavirus_1]
FPKM:1.89 TPM:1.75
5803 A_BomaMG_comp15569_c0_seq1
1527bp
FPKM:1.53 TPM:1.42
5804 A_BomaMG_comp155710_c0_seq1
236bp
hypothetical_protein_PHYSODRAFT_320541_[Phytophthora_sojae]
FPKM:1.12 TPM:1.04
5805 A_BomaMG_comp15571_c0_seq1
1175bp
PREDICTED:_SPARC-related_modular_calcium-binding_protein_1_[Amyelois_transitella]
GO:0001654 P eye development
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0030154 P cell differentiation
GO:0030198 P extracellular matrix organization
GO:0045667 P regulation of osteoblast differentiation
GO:0046872 F metal ion binding
GO:0050840 F extracellular matrix binding
GO:0060173 P limb development
FPKM:1.60 TPM:1.48
5806 A_BomaMG_comp15571_c1_seq1
817bp
PREDICTED:_SPARC-related_modular_calcium-binding_protein_1_isoform_X2_[Papilio_xuthus]
GO:0001654 P eye development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045667 P regulation of osteoblast differentiation
GO:0046872 F metal ion binding
GO:0060173 P limb development
FPKM:1.44 TPM:1.33
5807 A_BomaMG_comp15572_c0_seq1
425bp
FPKM:2.51 TPM:2.32
5808 A_BomaMG_comp15573_c0_seq1
505bp
39S_ribosomal_protein_L34,_mitochondrial_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:32.38 TPM:29.98
5809 A_BomaMG_comp15575_c0_seq1
528bp
FPKM:1.57 TPM:1.45
5810 A_BomaMG_comp155764_c0_seq1
310bp
PREDICTED:_protein_naked_cuticle_homolog_1_[Columba_livia]
FPKM:3.92 TPM:3.63
5811 A_BomaMG_comp15576_c0_seq1
796bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
FPKM:1.54 TPM:1.43
5812 A_BomaMG_comp15576_c1_seq1
1092bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.56 TPM:1.45
5813 A_BomaMG_comp155770_c0_seq1
346bp
FPKM:1.03 TPM:0.95
5814 A_BomaMG_comp15577_c0_seq1
1077bp
COP_complex_beta_subunit_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030137 C COPI-coated vesicle
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
FPKM:27.10 TPM:25.09
5815 A_BomaMG_comp15578_c0_seq1
1018bp
PREDICTED:_serine_hydroxymethyltransferase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004372 F glycine hydroxymethyltransferase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006544 P glycine metabolic process
GO:0006563 P L-serine metabolic process
GO:0006730 P one-carbon metabolic process
GO:0016740 F transferase activity
GO:0030170 F pyridoxal phosphate binding
GO:0035999 P tetrahydrofolate interconversion
GO:0046653 P tetrahydrofolate metabolic process
GO:0051289 P protein homotetramerization
FPKM:2.02 TPM:1.87
5816 A_BomaMG_comp15579_c0_seq1
391bp
PREDICTED:_CAS1_domain-containing_protein_1-like_isoform_X2_[Nicotiana_sylvestris]
FPKM:1.94 TPM:1.80
5817 A_BomaMG_comp1557_c0_seq1
377bp
PREDICTED:_NAC_domain-containing_protein_45_[Vitis_vinifera]
FPKM:1.39 TPM:1.28
5818 A_BomaMG_comp15581_c0_seq1
1054bp
Potassium_channel_regulator_[Operophtera_brumata]
GO:0004576 F oligosaccharyl transferase activity
GO:0004583 F dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
FPKM:1.55 TPM:1.44
5819 A_BomaMG_comp15581_c1_seq1
744bp
hypothetical_protein_KGM_15772_[Danaus_plexippus]
GO:0004576 F oligosaccharyl transferase activity
GO:0004583 F dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
FPKM:1.38 TPM:1.28
5820 A_BomaMG_comp15585_c0_seq1
362bp
PREDICTED:_solute_carrier_family_2,_facilitated_glucose_transporter_member_6-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.81 TPM:2.61
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