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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

5311

A_BomaMG_comp15126_c1_seq1

350bp

acyltransferase_[Rhizobium_leguminosarum]

FPKM:1.41 TPM:1.30

5312

A_BomaMG_comp15127_c0_seq1

314bp

glycerophosphoryl_diester_phosphodiesterase_[Anaerobiospirillum_succiniciproducens]

FPKM:1.52 TPM:1.41

5313

A_BomaMG_comp15127_c1_seq1

360bp

FPKM:0.95 TPM:0.88

5314

A_BomaMG_comp15128_c0_seq1

706bp

PREDICTED:_uncharacterized_protein_LOC106140290_[Amyelois_transitella]

FPKM:1.14 TPM:1.06

5315

A_BomaMG_comp15128_c0_seq2

714bp

putative_pol-like_protein,_partial_[Operophtera_brumata]

FPKM:1.93 TPM:1.79

5316

A_BomaMG_comp151295_c0_seq1

298bp

PREDICTED:_probable_phospholipid-transporting_ATPase_IIB_[Amyelois_transitella]

GO:0000166	F	nucleotide binding
GO:0000287	F	magnesium ion binding
GO:0004012	F	ATPase-coupled intramembrane lipid transporter activity
GO:0005524	F	ATP binding
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0005802	C	trans-Golgi network
GO:0005886	C	plasma membrane
GO:0006890	P	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006897	P	endocytosis
GO:0008152	P	metabolic process
GO:0015914	P	phospholipid transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016787	F	hydrolase activity
GO:0045332	P	phospholipid translocation
GO:0046872	F	metal ion binding

FPKM:3.74 TPM:3.46

5317

A_BomaMG_comp15130_c0_seq1

376bp

Zinc_finger_protein_Xfin_[Papilio_machaon]

FPKM:1.57 TPM:1.45

5318

A_BomaMG_comp15130_c1_seq1

284bp

PREDICTED:_zinc_finger_imprinted_3-like_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0001076	F	obsolete transcription factor activity, RNA polymerase II transcription factor binding
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005575	C	cellular_component
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007283	P	spermatogenesis
GO:0046872	F	metal ion binding

FPKM:1.95 TPM:1.80

5319

A_BomaMG_comp151313_c0_seq1

420bp

mfs_transporter_[Papilio_xuthus]

GO:0000166	F	nucleotide binding
GO:0005215	F	transporter activity
GO:0005524	F	ATP binding
GO:0005777	C	peroxisome
GO:0005778	C	peroxisomal membrane
GO:0005887	C	integral component of plasma membrane
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0009437	P	carnitine metabolic process
GO:0015226	F	carnitine transmembrane transporter activity
GO:0015491	F	cation:cation antiporter activity
GO:0015879	P	carnitine transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0022857	F	transmembrane transporter activity
GO:0031231	C	intrinsic component of peroxisomal membrane
GO:0055085	P	transmembrane transport
GO:0098655	P	cation transmembrane transport
GO:1902603	P	carnitine transmembrane transport

FPKM:2.70 TPM:2.50

5320

A_BomaMG_comp15131_c0_seq1

210bp

PREDICTED:_uncharacterized_protein_LOC105842882_[Bombyx_mori]

FPKM:0.00 TPM:0.00

5321

A_BomaMG_comp15131_c1_seq1

508bp

PREDICTED:_uncharacterized_protein_LOC101745524_isoform_X1_[Bombyx_mori]

GO:0001701	P	in utero embryonic development
GO:0001736	P	establishment of planar polarity
GO:0001822	P	kidney development
GO:0001889	P	liver development
GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005856	C	cytoskeleton
GO:0005911	C	cell-cell junction
GO:0005923	C	bicellular tight junction
GO:0005929	C	cilium
GO:0005930	C	axoneme
GO:0007163	P	establishment or maintenance of cell polarity
GO:0007368	P	determination of left/right symmetry
GO:0007420	P	brain development
GO:0008589	P	regulation of smoothened signaling pathway
GO:0021532	P	neural tube patterning
GO:0021537	P	telencephalon development
GO:0021549	P	cerebellum development
GO:0021670	P	lateral ventricle development
GO:0021772	P	olfactory bulb development
GO:0022038	P	corpus callosum development
GO:0030054	C	cell junction
GO:0031870	F	thromboxane A2 receptor binding
GO:0035108	P	limb morphogenesis
GO:0035115	P	embryonic forelimb morphogenesis
GO:0035116	P	embryonic hindlimb morphogenesis
GO:0035869	C	ciliary transition zone
GO:0036064	C	ciliary basal body
GO:0042384	P	cilium assembly
GO:0042995	C	cell projection
GO:0043010	P	camera-type eye development
GO:0043584	P	nose development
GO:0044767	P	developmental process
GO:0045744	P	negative regulation of G protein-coupled receptor signaling pathway
GO:0060039	P	pericardium development
GO:0060271	P	cilium assembly
GO:0060322	P	head development
GO:0090102	P	cochlea development

FPKM:1.25 TPM:1.15

5322

A_BomaMG_comp15132_c0_seq1

299bp

hypothetical_protein_[Streptococcus_suis]

FPKM:2.85 TPM:2.64

5323

A_BomaMG_comp15132_c1_seq1

392bp

hypothetical_protein_M514_02619_[Trichuris_suis]

FPKM:1.77 TPM:1.64

5324

A_BomaMG_comp15134_c0_seq1

369bp

PREDICTED:_uncharacterized_protein_LOC101735791_[Bombyx_mori]

GO:0005634	C	nucleus
GO:0005635	C	nuclear envelope
GO:0005643	C	nuclear pore
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0006810	P	transport
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0031965	C	nuclear membrane
GO:0046983	F	protein dimerization activity
GO:0051028	P	mRNA transport

FPKM:1.63 TPM:1.51

5325

A_BomaMG_comp15135_c0_seq1

777bp

PREDICTED:_rho_guanine_nucleotide_exchange_factor_17_isoform_X1_[Bombyx_mori]

GO:0005085	F	guanyl-nucleotide exchange factor activity
GO:0005089	F	guanyl-nucleotide exchange factor activity
GO:0005829	C	cytosol
GO:0030036	P	actin cytoskeleton organization
GO:0035023	P	regulation of Rho protein signal transduction
GO:0043065	P	positive regulation of apoptotic process
GO:0043547	P	positive regulation of GTPase activity
GO:0051056	P	regulation of small GTPase mediated signal transduction

FPKM:1.36 TPM:1.26

5326

A_BomaMG_comp15136_c0_seq1

217bp

PREDICTED:_phosphatidylinositol_4,5-bisphosphate_3-kinase_catalytic_subunit_delta_isoform_[Papilio_xuthus]

FPKM:3.82 TPM:3.53

5327

A_BomaMG_comp15136_c1_seq1

205bp

hypothetical_protein_KGM_10708_[Danaus_plexippus]

GO:0000166	F	nucleotide binding
GO:0001782	P	B cell homeostasis
GO:0002250	P	adaptive immune response
GO:0002376	P	immune system process
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0005942	C	phosphatidylinositol 3-kinase complex
GO:0006935	P	chemotaxis
GO:0006954	P	inflammatory response
GO:0007166	P	cell surface receptor signaling pathway
GO:0010628	P	positive regulation of gene expression
GO:0016301	F	kinase activity
GO:0016303	F	1-phosphatidylinositol-3-kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0030154	P	cell differentiation
GO:0030335	P	positive regulation of cell migration
GO:0035005	F	1-phosphatidylinositol-4-phosphate 3-kinase activity
GO:0036092	P	phosphatidylinositol-3-phosphate biosynthetic process
GO:0042113	P	B cell activation
GO:0045087	P	innate immune response
GO:0046854	P	phosphatidylinositol phosphate biosynthetic process
GO:0046934	F	phosphatidylinositol-4,5-bisphosphate 3-kinase activity
GO:0048015	P	phosphatidylinositol-mediated signaling
GO:0048872	P	homeostasis of number of cells
GO:0050832	P	defense response to fungus

FPKM:2.90 TPM:2.69

5328

A_BomaMG_comp15137_c0_seq1

231bp

FPKM:1.81 TPM:1.68

5329

A_BomaMG_comp15138_c0_seq1

1347bp

PREDICTED:_serine/threonine-protein_kinase_pelle-like_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0006468	P	protein phosphorylation
GO:0006606	P	protein import into nucleus
GO:0006915	P	apoptotic process
GO:0006952	P	defense response
GO:0007165	P	signal transduction
GO:0007352	P	zygotic specification of dorsal/ventral axis
GO:0008063	P	Toll signaling pathway
GO:0009620	P	response to fungus
GO:0009950	P	dorsal/ventral axis specification
GO:0016020	C	membrane
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0019732	P	antifungal humoral response
GO:0019904	F	protein domain specific binding
GO:0030097	P	hemopoiesis
GO:0030162	P	regulation of proteolysis
GO:0035172	P	hemocyte proliferation
GO:0035556	P	intracellular signal transduction
GO:0045087	P	innate immune response
GO:0046777	P	protein autophosphorylation
GO:0048262	P	determination of dorsal/ventral asymmetry

FPKM:6.82 TPM:6.32

5330

A_BomaMG_comp151396_c0_seq1

828bp

FPKM:1.83 TPM:1.70

5331

A_BomaMG_comp15139_c0_seq1

258bp

FPKM:2.96 TPM:2.74

5332

A_BomaMG_comp151406_c0_seq1

2084bp

PREDICTED:_importin_subunit_alpha-5-like_isoform_X2_[Bombyx_mori]

GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005643	C	nuclear pore
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006606	P	protein import into nucleus
GO:0006607	P	NLS-bearing protein import into nucleus
GO:0006810	P	transport
GO:0008139	F	nuclear localization sequence binding
GO:0008565	F	obsolete protein transporter activity
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0042826	F	histone deacetylase binding
GO:0044822	F	RNA binding