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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4591 A_BomaMG_comp14500_c0_seq1
600bp
hypothetical_protein_[Mycobacterium_mageritense]
FPKM:1.30 TPM:1.20
4592 A_BomaMG_comp14501_c0_seq1
339bp
PREDICTED:_uncharacterized_protein_LOC105841867_[Bombyx_mori]
FPKM:1.29 TPM:1.19
4593 A_BomaMG_comp14502_c0_seq1
258bp
PREDICTED:_septin-7_[Bombyx_mori]
FPKM:1.27 TPM:1.17
4594 A_BomaMG_comp145038_c0_seq1
716bp
PREDICTED:_phosphofurin_acidic_cluster_sorting_protein_1_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0016032 P viral process
GO:0030137 C COPI-coated vesicle
GO:0032092 P positive regulation of protein binding
GO:0034613 P cellular protein localization
GO:0044325 F transmembrane transporter binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050690 P regulation of defense response to virus by virus
GO:0072661 P protein localization to plasma membrane
FPKM:2.15 TPM:1.99
4595 A_BomaMG_comp14503_c0_seq1
346bp
FPKM:1.85 TPM:1.71
4596 A_BomaMG_comp14504_c0_seq1
235bp
FPKM:2.28 TPM:2.11
4597 A_BomaMG_comp14505_c0_seq1
581bp
FPKM:0.68 TPM:0.63
4598 A_BomaMG_comp14507_c0_seq1
415bp
AF117598_1_unknown_[Manduca_sexta]
FPKM:1.60 TPM:1.48
4599 A_BomaMG_comp14508_c0_seq1
277bp
PREDICTED:_PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN2_isoform_X2_[Bombyx_mori]
FPKM:2.42 TPM:2.24
4600 A_BomaMG_comp14508_c1_seq1
236bp
PREDICTED:_PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN2_isoform_X2_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016787 F hydrolase activity
GO:0031251 C PAN complex
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:1.68 TPM:1.56
4601 A_BomaMG_comp1450_c0_seq1
251bp
FPKM:0.92 TPM:0.85
4602 A_BomaMG_comp14512_c0_seq1
382bp
FPKM:1.52 TPM:1.41
4603 A_BomaMG_comp14515_c0_seq1
350bp
FPKM:2.01 TPM:1.86
4604 A_BomaMG_comp14516_c0_seq1
417bp
hypothetical_protein_SINV_02056,_partial_[Solenopsis_invicta]
FPKM:1.15 TPM:1.07
4605 A_BomaMG_comp14517_c0_seq1
254bp
hypothetical_protein_OIDMADRAFT_175591_[Oidiodendron_maius_Zn]
FPKM:1.33 TPM:1.23
4606 A_BomaMG_comp14518_c0_seq1
334bp
PREDICTED:_uncharacterized_protein_LOC106141127_[Amyelois_transitella]
FPKM:1.33 TPM:1.23
4607 A_BomaMG_comp14518_c1_seq1
212bp
FPKM:1.68 TPM:1.55
4608 A_BomaMG_comp14519_c0_seq1
452bp
PREDICTED:_major_facilitator_superfamily_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
FPKM:0.88 TPM:0.81
4609 A_BomaMG_comp14519_c0_seq2
238bp
PREDICTED:_major_facilitator_superfamily_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:2.73 TPM:2.53
4610 A_BomaMG_comp1451_c0_seq1
410bp
PREDICTED:_pentatricopeptide_repeat-containing_protein_At1g06145-like_[Cucumis_melo]
FPKM:0.74 TPM:0.69
4611 A_BomaMG_comp14520_c0_seq1
568bp
FPKM:0.00 TPM:0.00
4612 A_BomaMG_comp14520_c0_seq2
685bp
FPKM:2.88 TPM:2.67
4613 A_BomaMG_comp14521_c0_seq1
429bp
FPKM:1.64 TPM:1.52
4614 A_BomaMG_comp14523_c0_seq1
320bp
PREDICTED:_CTL-like_protein_1_isoform_X2_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.22 TPM:1.13
4615 A_BomaMG_comp14524_c0_seq1
481bp
FPKM:0.91 TPM:0.84
4616 A_BomaMG_comp14526_c0_seq1
204bp
FPKM:7.90 TPM:7.32
4617 A_BomaMG_comp14526_c1_seq1
324bp
hypothetical_protein_SOVF_016130_[Spinacia_oleracea]
FPKM:0.95 TPM:0.88
4618 A_BomaMG_comp145270_c0_seq1
1230bp
FPKM:1.90 TPM:1.76
4619 A_BomaMG_comp14527_c0_seq1
264bp
hypothetical_protein_TGAM01_05069_[Trichoderma_gamsii]
FPKM:1.58 TPM:1.47
4620 A_BomaMG_comp14528_c0_seq1
475bp
Protein_folded_gastrulation_[Operophtera_brumata]
FPKM:1.27 TPM:1.18
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