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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4531 A_BomaMG_comp14446_c0_seq1
475bp
spermidine_synthase_[Streptomyces_sp._MNU77]
FPKM:1.16 TPM:1.07
4532 A_BomaMG_comp14447_c0_seq1
254bp
PREDICTED:_glycerol-3-phosphate_acyltransferase_2,_mitochondrial_[Chrysemys_picta_bellii]
FPKM:1.33 TPM:1.23
4533 A_BomaMG_comp144489_c0_seq1
868bp
FPKM:1.43 TPM:1.32
4534 A_BomaMG_comp14448_c0_seq1
265bp
PREDICTED:_filamin-A_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007067 P mitotic cell cycle
GO:0007301 P female germline ring canal formation
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008104 P protein localization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008340 P determination of adult lifespan
GO:0008355 P olfactory learning
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030725 P germline ring canal formation
GO:0035182 C female germline ring canal outer rim
GO:0035183 C female germline ring canal inner rim
GO:0035204 P negative regulation of lamellocyte differentiation
GO:0035324 C female germline ring canal
GO:0045179 C apical cortex
GO:0048149 P behavioral response to ethanol
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051495 P positive regulation of cytoskeleton organization
GO:0070938 C contractile ring
FPKM:1.96 TPM:1.81
4535 A_BomaMG_comp14448_c1_seq1
242bp
PREDICTED:_filamin-A_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016528 C sarcoplasm
GO:0030018 C Z disc
GO:0030029 P actin filament-based process
GO:0030506 F ankyrin binding
GO:0042383 C sarcolemma
GO:0048747 P muscle cell development
GO:0051015 F actin filament binding
FPKM:2.06 TPM:1.91
4536 A_BomaMG_comp14449_c0_seq1
370bp
PREDICTED:_uncharacterized_protein_LOC105841932_[Bombyx_mori]
FPKM:1.62 TPM:1.50
4537 A_BomaMG_comp14449_c1_seq1
295bp
PREDICTED:_uncharacterized_protein_LOC105841932_[Bombyx_mori]
FPKM:1.18 TPM:1.09
4538 A_BomaMG_comp14450_c0_seq1
369bp
FPKM:1.08 TPM:1.00
4539 A_BomaMG_comp144526_c0_seq1
1280bp
PREDICTED:_uncharacterized_protein_LOC101739253_[Bombyx_mori]
FPKM:2.28 TPM:2.11
4540 A_BomaMG_comp14453_c0_seq1
229bp
FPKM:2.49 TPM:2.31
4541 A_BomaMG_comp14454_c0_seq1
250bp
PREDICTED:_TATA-binding_protein-associated_factor_172_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0035562 P negative regulation of chromatin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:2.79 TPM:2.59
4542 A_BomaMG_comp14456_c0_seq1
261bp
PREDICTED:_uncharacterized_protein_LOC103968471_[Musa_acuminata_subsp._malaccensis]
FPKM:1.99 TPM:1.84
4543 A_BomaMG_comp14457_c0_seq1
284bp
FPKM:2.27 TPM:2.10
4544 A_BomaMG_comp14457_c1_seq1
295bp
imidazole_glycerol_phosphate_synthase_subunit_HisH_[Methanococcoides_methylutens]
FPKM:2.36 TPM:2.18
4545 A_BomaMG_comp14459_c0_seq1
437bp
FPKM:1.19 TPM:1.11
4546 A_BomaMG_comp1445_c0_seq1
239bp
hypothetical_protein_FVEG_17697_[Fusarium_verticillioides_7600]
FPKM:1.61 TPM:1.49
4547 A_BomaMG_comp14460_c0_seq1
316bp
PREDICTED:_kelch-like_protein_5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
FPKM:1.25 TPM:1.16
4548 A_BomaMG_comp14461_c0_seq1
900bp
PREDICTED:_uncharacterized_protein_LOC106141418,_partial_[Amyelois_transitella]
FPKM:2.69 TPM:2.49
4549 A_BomaMG_comp144639_c0_seq1
665bp
Ubiquitin-protein_ligase_E3B_[Papilio_xuthus]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
FPKM:2.03 TPM:1.88
4550 A_BomaMG_comp14463_c0_seq1
326bp
FPKM:1.40 TPM:1.30
4551 A_BomaMG_comp14464_c0_seq1
732bp
PREDICTED:_uncharacterized_protein_LOC105842476_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005576 C extracellular region
FPKM:1.35 TPM:1.25
4552 A_BomaMG_comp14465_c0_seq1
235bp
FPKM:1.71 TPM:1.58
4553 A_BomaMG_comp144672_c0_seq1
527bp
FPKM:2.06 TPM:1.91
4554 A_BomaMG_comp14467_c0_seq1
318bp
FPKM:0.99 TPM:0.91
4555 A_BomaMG_comp14468_c0_seq1
214bp
PREDICTED:_peroxisome_assembly_protein_12_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006513 P protein monoubiquitination
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0007286 P spermatid development
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016558 P protein import into peroxisome matrix
GO:0046872 F metal ion binding
GO:0048137 P spermatocyte division
GO:1990429 C peroxisomal importomer complex
FPKM:4.03 TPM:3.74
4556 A_BomaMG_comp1446_c0_seq1
228bp
PREDICTED:_uncharacterized_protein_LOC101747197_[Bombyx_mori]
GO:0000228 C nuclear chromosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005721 C pericentric heterochromatin
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018992 P germ-line sex determination
GO:0031490 F chromatin DNA binding
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0042054 F histone methyltransferase activity
GO:0046872 F metal ion binding
FPKM:2.53 TPM:2.35
4557 A_BomaMG_comp14471_c0_seq1
390bp
FPKM:1.14 TPM:1.05
4558 A_BomaMG_comp14472_c0_seq1
261bp
FPKM:1.64 TPM:1.51
4559 A_BomaMG_comp144745_c0_seq1
244bp
FPKM:1.51 TPM:1.40
4560 A_BomaMG_comp14474_c0_seq1
263bp
hypothetical_protein_[Hyalangium_minutum]
FPKM:0.80 TPM:0.74
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