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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
241 A_BomaMG_comp104677_c0_seq1
372bp
PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016477 P cell migration
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030509 P BMP signaling pathway
GO:0036459 F thiol-dependent deubiquitinase
GO:0070410 F co-SMAD binding
FPKM:5.33 TPM:4.94
242 A_BomaMG_comp104734_c0_seq1
419bp
cytochrome_P450_monooxygenase,_partial_[Fusarium_sibiricum]
FPKM:2.71 TPM:2.51
243 A_BomaMG_comp104757_c0_seq1
526bp
FPKM:3.25 TPM:3.01
244 A_BomaMG_comp1047_c0_seq1
229bp
hypothetical_protein_AKJ59_00850_[candidate_divison_MSBL1_archaeon_SCGC-AAA385M02]
FPKM:2.49 TPM:2.31
245 A_BomaMG_comp1047_c1_seq1
213bp
FPKM:1.64 TPM:1.52
246 A_BomaMG_comp10480_c0_seq1
213bp
putative_60S_ribosomal_protein_L2_[Trypanosoma_congolense_IL3000]
FPKM:0.82 TPM:0.76
247 A_BomaMG_comp10484_c0_seq1
308bp
FPKM:1.06 TPM:0.98
248 A_BomaMG_comp104853_c0_seq1
952bp
PREDICTED:_ATP-binding_cassette_sub-family_A_member_3-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005887 C integral component of plasma membrane
GO:0006649 P phospholipid transfer to membrane
GO:0006810 P transport
GO:0007601 P visual perception
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045332 P phospholipid translocation
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
FPKM:3.03 TPM:2.81
249 A_BomaMG_comp104877_c0_seq1
2426bp
PREDICTED:_kinesin-like_protein_KIF21A_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
FPKM:2.85 TPM:2.64
250 A_BomaMG_comp104881_c0_seq1
309bp
FPKM:2.11 TPM:1.95
251 A_BomaMG_comp104927_c0_seq1
602bp
PREDICTED:_sulfite_oxidase_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006790 P sulfur compound metabolic process
GO:0008482 F sulfite oxidase activity
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030151 F molybdenum ion binding
GO:0042128 P nitrate assimilation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.77 TPM:1.64
252 A_BomaMG_comp10492_c0_seq1
207bp
PREDICTED:_uncharacterized_protein_LOC106713325_[Papilio_machaon]
FPKM:2.78 TPM:2.58
253 A_BomaMG_comp10493_c0_seq1
471bp
MULTISPECIES:_hypothetical_protein_[Staphylococcus]
FPKM:0.94 TPM:0.87
254 A_BomaMG_comp104948_c0_seq1
1941bp
PREDICTED:_probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Amyelois_transitella]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.52 TPM:2.33
255 A_BomaMG_comp10495_c0_seq1
205bp
FPKM:2.88 TPM:2.67
256 A_BomaMG_comp105017_c0_seq1
2653bp
PREDICTED:_uncharacterized_protein_LOC106131382_[Amyelois_transitella]
FPKM:2.65 TPM:2.46
257 A_BomaMG_comp10502_c0_seq1
252bp
PREDICTED:_probable_GPI-anchored_adhesin-like_protein_PGA55_[Bombyx_mori]
FPKM:1.36 TPM:1.26
258 A_BomaMG_comp105041_c0_seq1
907bp
PREDICTED:_probable_phospholipid-transporting_ATPase_IIB_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006897 P endocytosis
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
FPKM:2.99 TPM:2.77
259 A_BomaMG_comp105075_c0_seq1
451bp
FPKM:2.14 TPM:1.98
260 A_BomaMG_comp105109_c0_seq1
1720bp
FPKM:2.66 TPM:2.46
261 A_BomaMG_comp105148_c0_seq1
430bp
conserved_hypothetical_protein_[Methanocella_paludicola_SANAE]
FPKM:3.27 TPM:3.03
262 A_BomaMG_comp10518_c0_seq1
224bp
FPKM:4.05 TPM:3.75
263 A_BomaMG_comp1051_c0_seq1
452bp
PREDICTED:_E3_ubiquitin-protein_ligase_CBL-B-B_isoform_X1_[Amyelois_transitella]
FPKM:1.00 TPM:0.93
264 A_BomaMG_comp105213_c0_seq1
1907bp
PREDICTED:_isoleucine--tRNA_ligase,_mitochondrial_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004822 F isoleucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006428 P isoleucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
FPKM:1.98 TPM:1.83
265 A_BomaMG_comp10522_c0_seq1
463bp
FPKM:0.96 TPM:0.89
266 A_BomaMG_comp10529_c0_seq1
260bp
FPKM:1.24 TPM:1.15
267 A_BomaMG_comp10530_c0_seq1
275bp
FPKM:0.35 TPM:0.33
268 A_BomaMG_comp10537_c0_seq1
287bp
amino_acid_ABC_transporter_substrate-binding_protein_[Devosia_sp._A16]
FPKM:0.00 TPM:0.00
269 A_BomaMG_comp10537_c0_seq2
259bp
amino_acid_ABC_transporter_substrate-binding_protein_[Devosia_sp._A16]
FPKM:1.67 TPM:1.55
270 A_BomaMG_comp105380_c0_seq1
383bp
PREDICTED:_dyslexia-associated_protein_KIAA0319_[Bombyx_mori]
FPKM:3.87 TPM:3.58
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