SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/50247
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
871 A_SariMSG_c11134_g1_i1
237bp
RecName:_Full=Microvitellogenin;_Flags:_Precursor
GO:0005576 C extracellular region
FPKM:2.81 TPM:1.80
872 A_SariMSG_c11135_g1_i1
256bp
FPKM:5.23 TPM:3.34
873 A_SariMSG_c11136_g1_i1
297bp
LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_17_[Helicoverpa_armigera]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:4.21 TPM:2.69
874 A_SariMSG_c11137_g1_i1
215bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC110119630,_partial_[Bombus_terrestris]
FPKM:0.92 TPM:0.59
875 A_SariMSG_c11138_g1_i1
628bp
FPKM:2.85 TPM:1.82
876 A_SariMSG_c11139_g1_i1
1216bp
lysine-specific_demethylase_lid_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
FPKM:2.50 TPM:1.60
877 A_SariMSG_c1113_g1_i1
215bp
FPKM:2.76 TPM:1.76
878 A_SariMSG_c11141_g1_i1
820bp
FPKM:1.30 TPM:0.83
879 A_SariMSG_c11143_g1_i1
3467bp
Ef1alpha-like_factor_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002184 P cytoplasmic translational termination
GO:0003747 F translation release factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006479 P protein methylation
GO:0018444 C translation release factor complex
GO:0044822 F RNA binding
FPKM:123.37 TPM:78.74
880 A_SariMSG_c11144_g1_i1
340bp
FPKM:3.59 TPM:2.29
881 A_SariMSG_c11145_g1_i1
268bp
PREDICTED:_uncharacterized_protein_LOC105395535_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
FPKM:4.71 TPM:3.01
882 A_SariMSG_c11146_g1_i1
426bp
Ecto-nucleotidase_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
FPKM:2.47 TPM:1.58
883 A_SariMSG_c11147_g1_i1
1869bp
uncharacterized_protein_LOC101739845_[Bombyx_mori]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0030414 F peptidase inhibitor activity
FPKM:31.83 TPM:20.31
884 A_SariMSG_c11147_g1_i2
1431bp
uncharacterized_protein_LOC110383835_isoform_X2_[Helicoverpa_armigera]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0030414 F peptidase inhibitor activity
FPKM:105.32 TPM:67.22
885 A_SariMSG_c11148_g1_i1
262bp
hypothetical_protein_KGM_204915_[Danaus_plexippus_plexippus]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0044212 F transcription cis-regulatory region binding
GO:0045502 F dynein complex binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0060271 P cilium assembly
FPKM:4.96 TPM:3.16
886 A_SariMSG_c11149_g1_i1
535bp
hemicentin-2_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.58 TPM:1.64
887 A_SariMSG_c1114_g1_i1
349bp
FPKM:5.29 TPM:3.38
888 A_SariMSG_c11150_g1_i1
238bp
FPKM:9.04 TPM:5.77
889 A_SariMSG_c11151_g1_i1
356bp
protein_O-mannosyl-transferase_2_isoform_X1_[Helicoverpa_armigera]
GO:0000030 F mannosyltransferase activity
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:0045214 P sarcomere organization
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
FPKM:2.71 TPM:1.73
890 A_SariMSG_c11152_g1_i1
437bp
FPKM:2.38 TPM:1.52
891 A_SariMSG_c11153_g1_i1
239bp
FPKM:3.44 TPM:2.20
892 A_SariMSG_c11154_g1_i1
205bp
autophagy-related_protein_9A_[Bombyx_mori]
GO:0000421 C autophagosome membrane
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
FPKM:4.26 TPM:2.72
893 A_SariMSG_c11155_g1_i1
253bp
TPPP_family_protein_CG45057_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0048812 P neuron projection morphogenesis
FPKM:2.39 TPM:1.53
894 A_SariMSG_c11157_g1_i1
643bp
cuticle_collagen_2C-like_[Helicoverpa_armigera]
FPKM:112.34 TPM:71.70
895 A_SariMSG_c11158_g1_i1
643bp
BAG_domain-containing_protein_Samui_isoform_X2_[Bombyx_mori]
GO:0007275 P multicellular organism development
GO:0030544 F Hsp70 protein binding
GO:0051087 F chaperone binding
FPKM:2.89 TPM:1.85
896 A_SariMSG_c11159_g1_i1
203bp
FPKM:0.00 TPM:0.00
897 A_SariMSG_c1115_g1_i1
344bp
ELAV_protein_3_isoform_2_[Danaus_plexippus_plexippus]
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0007281 P germ cell development
GO:0007319 P negative regulation of oskar mRNA translation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0008266 F poly(U) RNA binding
GO:0009790 P embryo development
GO:0015030 C Cajal body
GO:0016070 P RNA metabolic process
GO:0031441 P negative regulation of mRNA 3'-end processing
FPKM:3.19 TPM:2.04
898 A_SariMSG_c11160_g1_i1
204bp
FPKM:16.24 TPM:10.37
899 A_SariMSG_c11161_g1_i1
869bp
PREDICTED:_ER_membrane_protein_complex_subunit_7_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:34.76 TPM:22.18
900 A_SariMSG_c11163_g1_i1
656bp
PREDICTED:_inverted_formin-2_isoform_X2_[Amyelois_transitella]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0032535 P regulation of cellular component size
GO:0048471 C perinuclear region of cytoplasm
GO:0090140 P regulation of mitochondrial fission
FPKM:0.75 TPM:0.48
previous next from show/50247

- SilkBase 1999-2023 -