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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
61 A_SariMSG_c10094_g1_i1
1765bp
PREDICTED:_malate_dehydrogenase,_mitochondrial_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006099 P tricarboxylic acid cycle
GO:0006108 P malate metabolic process
GO:0006475 P internal protein amino acid acetylation
GO:0016491 F oxidoreductase activity
GO:0016615 F malate dehydrogenase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019752 P carboxylic acid metabolic process
GO:0030060 F L-malate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:69.22 TPM:44.18
62 A_SariMSG_c10095_g1_i1
363bp
nuclear_pore_complex_protein_Nup107_[Helicoverpa_armigera]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
FPKM:26.47 TPM:16.89
63 A_SariMSG_c10098_g1_i1
3310bp
dihydropyrimidine_dehydrogenase_[NADP(+)]_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0019483 P beta-alanine biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:43.45 TPM:27.73
64 A_SariMSG_c1009_g1_i1
288bp
FPKM:1.35 TPM:0.86
65 A_SariMSG_c100_g1_i1
262bp
FPKM:2.20 TPM:1.41
66 A_SariMSG_c10100_g1_i1
241bp
dolichyl-diphosphooligosaccharide--protein_glycosyltransferase_subunit_2_[Bombyx_mori]
FPKM:2.02 TPM:1.29
67 A_SariMSG_c10101_g1_i1
355bp
FPKM:2.12 TPM:1.35
68 A_SariMSG_c10103_g1_i1
202bp
FPKM:0.00 TPM:0.00
69 A_SariMSG_c10104_g1_i1
252bp
PREDICTED:_uncharacterized_protein_LOC106129474_isoform_X2_[Amyelois_transitella]
FPKM:1.81 TPM:1.16
70 A_SariMSG_c10105_g1_i1
287bp
H+_transporting_ATP_synthase_subunit_e_[Bombyx_mori]
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005753 C mitochondrial proton-transporting ATP synthase complex
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046034 P ATP metabolic process
FPKM:3.16 TPM:2.02
71 A_SariMSG_c10107_g1_i1
204bp
apoptosis-inducing_factor_[Bombyx_mori]
FPKM:2.17 TPM:1.38
72 A_SariMSG_c10108_g1_i1
220bp
uncharacterized_protein_LOC101740259,_partial_[Bombyx_mori]
FPKM:0.86 TPM:0.55
73 A_SariMSG_c10109_g1_i1
448bp
FPKM:2.08 TPM:1.33
74 A_SariMSG_c10110_g1_i1
568bp
FPKM:20.24 TPM:12.92
75 A_SariMSG_c10111_g1_i1
299bp
PREDICTED:_uncharacterized_protein_LOC106711568,_partial_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:7.06 TPM:4.51
76 A_SariMSG_c10113_g1_i1
343bp
FPKM:5.78 TPM:3.69
77 A_SariMSG_c10114_g1_i1
240bp
PREDICTED:_uncharacterized_protein_LOC105390024_[Plutella_xylostella]
FPKM:1.36 TPM:0.87
78 A_SariMSG_c10115_g1_i1
340bp
hypothetical_protein_ALC56_03707_[Trachymyrmex_septentrionalis]
FPKM:1.30 TPM:0.83
79 A_SariMSG_c10117_g1_i1
378bp
TBC1_domain_family_member_5_[Helicoverpa_armigera]
GO:0002092 P positive regulation of receptor internalization
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0010008 C endosome membrane
GO:0010508 P positive regulation of autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030122 C AP-2 adaptor complex
GO:0030904 C retromer complex
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0035612 F AP-2 adaptor complex binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042594 P response to starvation
GO:0090630 P activation of GTPase activity
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1902017 P regulation of cilium assembly
GO:1990316 C Atg1/ULK1 kinase complex
FPKM:3.26 TPM:2.08
80 A_SariMSG_c10118_g1_i1
463bp
FPKM:6.73 TPM:4.30
81 A_SariMSG_c10119_g1_i1
256bp
FPKM:2.91 TPM:1.86
82 A_SariMSG_c1011_g1_i1
434bp
PREDICTED:_protein_dispatched_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0006887 P exocytosis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0008158 F hedgehog receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.96 TPM:1.25
83 A_SariMSG_c10120_g1_i1
246bp
FPKM:3.84 TPM:2.45
84 A_SariMSG_c10120_g1_i2
223bp
FPKM:0.00 TPM:0.00
85 A_SariMSG_c10121_g1_i1
216bp
FPKM:2.72 TPM:1.74
86 A_SariMSG_c10122_g1_i1
254bp
FPKM:1.18 TPM:0.76
87 A_SariMSG_c10123_g1_i1
367bp
Myosuppressin_receptor_[Operophtera_brumata]
FPKM:1.43 TPM:0.91
88 A_SariMSG_c10124_g1_i1
282bp
FPKM:0.47 TPM:0.30
89 A_SariMSG_c10125_g1_i1
216bp
LOW_QUALITY_PROTEIN:_two_pore_calcium_channel_protein_1_[Bombyx_mori]
FPKM:1.82 TPM:1.16
90 A_SariMSG_c10126_g1_i1
220bp
FPKM:0.00 TPM:0.00
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