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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
451 A_SariMSG_c10620_g1_i1
272bp
PREDICTED:_juxtaposed_with_another_zinc_finger_protein_1_[Amyelois_transitella]
FPKM:1.52 TPM:0.97
452 A_SariMSG_c10621_g1_i1
402bp
PREDICTED:_jmjC_domain-containing_histone_demethylation_protein_1_isoform_X2_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0019005 C SCF ubiquitin ligase complex
GO:0019233 P sensory perception of pain
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031519 C PcG protein complex
GO:0033522 P histone H2A ubiquitination
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
FPKM:1.72 TPM:1.10
453 A_SariMSG_c10622_g1_i1
461bp
FPKM:1.39 TPM:0.89
454 A_SariMSG_c10623_g1_i1
335bp
FPKM:2.34 TPM:1.50
455 A_SariMSG_c10625_g1_i1
255bp
hypothetical_protein_X777_00731_[Ooceraea_biroi]
FPKM:4.69 TPM:3.00
456 A_SariMSG_c10626_g1_i1
430bp
FPKM:3.54 TPM:2.26
457 A_SariMSG_c10628_g1_i1
846bp
uncharacterized_protein_LOC110381384_[Helicoverpa_armigera]
FPKM:3.03 TPM:1.93
458 A_SariMSG_c10629_g1_i1
267bp
FPKM:4.22 TPM:2.70
459 A_SariMSG_c1062_g1_i1
315bp
Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.13 TPM:0.72
460 A_SariMSG_c10630_g1_i1
507bp
FPKM:2.60 TPM:1.66
461 A_SariMSG_c10632_g1_i1
372bp
FPKM:1.95 TPM:1.25
462 A_SariMSG_c10634_g1_i1
462bp
FPKM:1.28 TPM:0.82
463 A_SariMSG_c10634_g1_i2
218bp
FPKM:1.39 TPM:0.89
464 A_SariMSG_c10635_g1_i1
241bp
FPKM:0.00 TPM:0.00
465 A_SariMSG_c10636_g1_i1
238bp
FPKM:3.48 TPM:2.22
466 A_SariMSG_c10638_g1_i1
520bp
FPKM:2.68 TPM:1.71
467 A_SariMSG_c10639_g1_i1
251bp
FPKM:1.83 TPM:1.17
468 A_SariMSG_c1063_g1_i1
361bp
oocyte_zinc_finger_protein_XlCOF6_isoform_X3_[Bombyx_mori]
FPKM:2.35 TPM:1.50
469 A_SariMSG_c1063_g1_i2
331bp
zinc_finger_protein_555-like_[Helicoverpa_armigera]
FPKM:0.00 TPM:0.00
470 A_SariMSG_c10641_g1_i1
250bp
FPKM:3.69 TPM:2.36
471 A_SariMSG_c10642_g1_i1
242bp
FPKM:0.02 TPM:0.01
472 A_SariMSG_c10642_g1_i2
352bp
FPKM:2.75 TPM:1.76
473 A_SariMSG_c10643_g1_i1
348bp
FPKM:2.50 TPM:1.60
474 A_SariMSG_c10645_g1_i1
380bp
FPKM:1.62 TPM:1.03
475 A_SariMSG_c10646_g1_i1
437bp
FPKM:7.13 TPM:4.55
476 A_SariMSG_c10647_g1_i1
577bp
FPKM:3.63 TPM:2.32
477 A_SariMSG_c10648_g1_i1
247bp
PREDICTED:_uncharacterized_protein_LOC106134519_isoform_X2_[Amyelois_transitella]
FPKM:1.90 TPM:1.21
478 A_SariMSG_c10649_g1_i1
292bp
PREDICTED:_VWFA_and_cache_domain-containing_protein_CG16868_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:7.85 TPM:5.01
479 A_SariMSG_c1064_g1_i1
340bp
uncharacterized_protein_LOC101746725_[Bombyx_mori]
FPKM:3.59 TPM:2.29
480 A_SariMSG_c10651_g1_i1
213bp
Ubiquitin-conjugating_enzyme_E2-17_kDa_[Habropoda_laboriosa]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005875 C microtubule associated complex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007140 P male meiotic nuclear division
GO:0007286 P spermatid development
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0016322 P neuron remodeling
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0030718 P germ-line stem cell population maintenance
GO:0031625 F ubiquitin protein ligase binding
GO:0031647 P regulation of protein stability
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045676 P regulation of R7 cell differentiation
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
FPKM:3.79 TPM:2.42
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