SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/50247
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_SariMSG_c12216_g1_i1
534bp
uncharacterized_protein_LOC110377873_[Helicoverpa_armigera]
FPKM:3.87 TPM:2.47
1922 A_SariMSG_c12217_g1_i1
2048bp
sugar_transporter_protein_3_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:39.19 TPM:25.02
1923 A_SariMSG_c12218_g1_i1
615bp
organic_cation_transporter-like_protein_[Helicoverpa_armigera]
GO:0005215 F transporter activity
GO:0005277 F acetylcholine transmembrane transporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005333 F norepinephrine:sodium symporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006836 P neurotransmitter transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008504 F monoamine transmembrane transporter activity
GO:0008513 F secondary active organic cation transmembrane transporter activity
GO:0010248 P establishment or maintenance of transmembrane electrochemical gradient
GO:0015101 F organic cation transmembrane transporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015697 P quaternary ammonium group transport
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0015874 P norepinephrine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0048241 P epinephrine transport
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:1901374 P acetate ester transport
FPKM:3.60 TPM:2.30
1924 A_SariMSG_c12219_g1_i1
443bp
FPKM:3.81 TPM:2.43
1925 A_SariMSG_c1221_g1_i1
627bp
similar_to_CG42678_[Papilio_xuthus]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005874 C microtubule
GO:0006998 P nuclear envelope organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007084 P mitotic nuclear membrane reassembly
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051301 P cell division
FPKM:1.20 TPM:0.77
1926 A_SariMSG_c1221_g1_i2
482bp
PREDICTED:_receptor_expression-enhancing_protein_1_isoform_X1_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005881 C cytoplasmic microtubule
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.45 TPM:0.93
1927 A_SariMSG_c12220_g1_i1
766bp
39S_ribosomal_protein_L53,_mitochondrial-like_isoform_X1_[Helicoverpa_armigera]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
FPKM:29.99 TPM:19.14
1928 A_SariMSG_c12221_g1_i1
562bp
oxidation_resistance_protein_1_isoform_X9_[Helicoverpa_armigera]
GO:0005739 C mitochondrion
FPKM:2.71 TPM:1.73
1929 A_SariMSG_c12223_g1_i1
327bp
FPKM:0.00 TPM:0.00
1930 A_SariMSG_c12223_g1_i2
353bp
FPKM:5.49 TPM:3.51
1931 A_SariMSG_c12224_g1_i1
308bp
FPKM:8.23 TPM:5.25
1932 A_SariMSG_c12225_g1_i1
500bp
PREDICTED:_protein_xmas-2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048477 P oogenesis
FPKM:7.79 TPM:4.97
1933 A_SariMSG_c12228_g1_i1
636bp
hypothetical_protein_KGM_213587_[Danaus_plexippus_plexippus]
FPKM:2.68 TPM:1.71
1934 A_SariMSG_c12230_g1_i1
279bp
ribosomal_protein_L19_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0051298 P centrosome duplication
FPKM:4.31 TPM:2.75
1935 A_SariMSG_c12231_g1_i1
499bp
uncharacterized_protein_LOC110374271_isoform_X2_[Helicoverpa_armigera]
FPKM:2.31 TPM:1.47
1936 A_SariMSG_c12232_g1_i1
453bp
F-box_only_protein_32_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
FPKM:2.05 TPM:1.31
1937 A_SariMSG_c12234_g1_i1
342bp
FPKM:8.39 TPM:5.35
1938 A_SariMSG_c12235_g1_i1
303bp
FPKM:0.98 TPM:0.63
1939 A_SariMSG_c12235_g1_i2
708bp
PREDICTED:_nuclear_pore_complex_protein_Nup214_isoform_X2_[Amyelois_transitella]
FPKM:3.17 TPM:2.03
1940 A_SariMSG_c12236_g1_i1
335bp
FPKM:4.69 TPM:2.99
1941 A_SariMSG_c12237_g1_i1
234bp
FPKM:5.09 TPM:3.25
1942 A_SariMSG_c12237_g2_i1
292bp
FPKM:3.92 TPM:2.50
1943 A_SariMSG_c12238_g1_i1
223bp
FPKM:4.97 TPM:3.17
1944 A_SariMSG_c12239_g1_i1
352bp
FPKM:3.07 TPM:1.96
1945 A_SariMSG_c1223_g1_i1
209bp
FPKM:2.01 TPM:1.28
1946 A_SariMSG_c12240_g1_i1
263bp
FPKM:3.28 TPM:2.09
1947 A_SariMSG_c12241_g1_i1
2122bp
LOW_QUALITY_PROTEIN:_caprin_homolog_[Helicoverpa_armigera]
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0007349 P cellularization
GO:0009794 P regulation of mitotic cell cycle, embryonic
GO:0030529 C ribonucleoprotein complex
GO:0045571 P negative regulation of imaginal disc growth
FPKM:24.77 TPM:15.81
1948 A_SariMSG_c12242_g1_i1
368bp
cationic_amino_acid_transporter_3_[Helicoverpa_armigera]
GO:0000064 F L-ornithine transmembrane transporter activity
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015174 F basic amino acid transmembrane transporter activity
GO:0015181 F L-arginine transmembrane transporter activity
GO:0015189 F L-lysine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015809 P L-arginine transmembrane transport
GO:0015819 P lysine transport
GO:0015822 P ornithine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032006 P regulation of TOR signaling
GO:1902475 P L-alpha-amino acid transmembrane transport
GO:1903352 P L-ornithine transmembrane transport
GO:1903401 P L-lysine transmembrane transport
GO:1903826 P L-arginine transmembrane transport
GO:1990822 P basic amino acid transmembrane transport
FPKM:2.56 TPM:1.63
1949 A_SariMSG_c12245_g1_i1
412bp
putative_gag-related_protein_[Lymantria_dispar]
FPKM:4.26 TPM:2.72
1950 A_SariMSG_c12247_g1_i1
446bp
FPKM:3.98 TPM:2.54
previous next from show/50247

- SilkBase 1999-2023 -