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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1861 A_SariMSG_c12139_g1_i1
449bp
FPKM:6.22 TPM:3.97
1862 A_SariMSG_c12140_g1_i1
210bp
Pol_protein_[Bombyx_mori]
FPKM:6.92 TPM:4.42
1863 A_SariMSG_c12141_g1_i1
285bp
FPKM:4.12 TPM:2.63
1864 A_SariMSG_c12142_g1_i1
740bp
Uncharacterized_protein_OBRU01_06296_[Operophtera_brumata]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
FPKM:8.30 TPM:5.30
1865 A_SariMSG_c12143_g1_i1
394bp
FPKM:4.06 TPM:2.59
1866 A_SariMSG_c12144_g1_i1
309bp
PREDICTED:_protein_suppressor_of_white_apricot_[Amyelois_transitella]
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000395 P mRNA 5'-splice site recognition
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
FPKM:9.35 TPM:5.97
1867 A_SariMSG_c12145_g1_i1
574bp
FPKM:2.78 TPM:1.77
1868 A_SariMSG_c12148_g1_i1
405bp
uncharacterized_protein_LOC110374337_isoform_X1_[Helicoverpa_armigera]
FPKM:4.13 TPM:2.64
1869 A_SariMSG_c12149_g1_i1
706bp
PREDICTED:_polycomb_protein_suz12-B_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0035098 C ESC/E(Z) complex
GO:0046872 F metal ion binding
FPKM:2.34 TPM:1.49
1870 A_SariMSG_c12151_g1_i1
242bp
FPKM:1.33 TPM:0.85
1871 A_SariMSG_c12152_g1_i1
371bp
FPKM:7.57 TPM:4.83
1872 A_SariMSG_c12153_g1_i1
543bp
poly(A)_RNA_polymerase_gld-2_homolog_A-like_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0001556 P oocyte maturation
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003723 F RNA binding
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0007017 P microtubule-based process
GO:0007052 P mitotic spindle organization
GO:0007056 P spindle assembly involved in female meiosis
GO:0007343 P egg activation
GO:0007344 P pronuclear fusion
GO:0008298 P intracellular mRNA localization
GO:0016740 F transferase activity
GO:0035044 P sperm aster formation
GO:0035046 P pronuclear migration
GO:0043631 P RNA polyadenylation
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
FPKM:6.15 TPM:3.93
1873 A_SariMSG_c12154_g1_i1
406bp
glycosyltransferase_25_family_member_isoform_X2_[Helicoverpa_armigera]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
FPKM:1.21 TPM:0.77
1874 A_SariMSG_c12155_g1_i1
325bp
FPKM:2.57 TPM:1.64
1875 A_SariMSG_c12155_g1_i2
206bp
FPKM:0.78 TPM:0.50
1876 A_SariMSG_c12156_g1_i1
892bp
trafficking_protein_particle_complex_subunit_8_[Helicoverpa_armigera]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
FPKM:3.76 TPM:2.40
1877 A_SariMSG_c12158_g1_i1
231bp
uncharacterized_protein_LOC101743106_isoform_X1_[Bombyx_mori]
FPKM:180.55 TPM:115.24
1878 A_SariMSG_c12159_g1_i1
418bp
FPKM:1.39 TPM:0.89
1879 A_SariMSG_c12159_g1_i2
238bp
FPKM:0.00 TPM:0.00
1880 A_SariMSG_c1215_g1_i1
243bp
FPKM:0.66 TPM:0.42
1881 A_SariMSG_c12160_g1_i1
513bp
helicase_POLQ-like_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006259 P DNA metabolic process
GO:0016787 F hydrolase activity
GO:0017116 F single-stranded DNA helicase activity
GO:0017117 C single-stranded DNA-dependent ATP-dependent DNA helicase complex
GO:0032508 P DNA duplex unwinding
FPKM:2.05 TPM:1.31
1882 A_SariMSG_c12161_g1_i1
621bp
FPKM:5.26 TPM:3.36
1883 A_SariMSG_c12162_g1_i1
531bp
FPKM:4.55 TPM:2.91
1884 A_SariMSG_c12164_g1_i1
554bp
PREDICTED:_rho_guanine_nucleotide_exchange_factor_18_isoform_X1_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0021955 P central nervous system neuron axonogenesis
GO:0030154 P cell differentiation
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0060052 P neurofilament cytoskeleton organization
FPKM:3.22 TPM:2.06
1885 A_SariMSG_c12165_g1_i1
317bp
FPKM:1.48 TPM:0.95
1886 A_SariMSG_c12167_g1_i1
430bp
PREDICTED:_monocarboxylate_transporter_14-like_[Papilio_machaon]
FPKM:2.43 TPM:1.55
1887 A_SariMSG_c12168_g1_i1
211bp
FPKM:1.95 TPM:1.24
1888 A_SariMSG_c1216_g1_i1
689bp
probable_Golgi_SNAP_receptor_complex_member_2_[Helicoverpa_armigera]
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006896 P Golgi to vacuole transport
GO:0006906 P vesicle fusion
GO:0006909 P phagocytosis
GO:0007430 P terminal branching, open tracheal system
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0031902 C late endosome membrane
GO:0042147 P retrograde transport, endosome to Golgi
GO:0048280 P vesicle fusion with Golgi apparatus
GO:0060439 P trachea morphogenesis
FPKM:36.91 TPM:23.56
1889 A_SariMSG_c12173_g1_i1
354bp
GPI_mannosyltransferase_2_[Helicoverpa_armigera]
GO:0000030 F mannosyltransferase activity
GO:0004584 F obsolete dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031501 C mannosyltransferase complex
GO:0097502 P mannosylation
FPKM:3.34 TPM:2.13
1890 A_SariMSG_c12174_g1_i1
267bp
sugar_transporter_SWEET1_[Bombyx_mori]
FPKM:6.86 TPM:4.38
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