SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/50247
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1801 A_SariMSG_c12085_g1_i1
627bp
F-box_only_protein_32_isoform_X2_[Helicoverpa_armigera]
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
FPKM:2.47 TPM:1.58
1802 A_SariMSG_c12086_g1_i1
790bp
PREDICTED:_signal_peptidase_complex_subunit_3_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005787 C signal peptidase complex
GO:0005789 C endoplasmic reticulum membrane
GO:0006465 P signal peptide processing
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
FPKM:124.36 TPM:79.37
1803 A_SariMSG_c12087_g1_i1
365bp
PREDICTED:_DNA_replication_licensing_factor_Mcm3_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
FPKM:12.68 TPM:8.09
1804 A_SariMSG_c12088_g1_i1
508bp
FPKM:4.50 TPM:2.87
1805 A_SariMSG_c12090_g1_i1
323bp
FPKM:4.30 TPM:2.74
1806 A_SariMSG_c12091_g1_i1
557bp
putative_ATPase_N2B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
FPKM:5.33 TPM:3.40
1807 A_SariMSG_c12092_g1_i1
244bp
FPKM:7.18 TPM:4.59
1808 A_SariMSG_c12093_g1_i1
355bp
Uncharacterized_protein_C12orf26-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
FPKM:2.12 TPM:1.35
1809 A_SariMSG_c12094_g1_i1
209bp
FPKM:4.01 TPM:2.56
1810 A_SariMSG_c12095_g1_i1
774bp
insulin_receptor_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0043548 F phosphatidylinositol 3-kinase binding
GO:0043560 F insulin receptor substrate binding
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
FPKM:2.58 TPM:1.65
1811 A_SariMSG_c12096_g1_i1
797bp
3-hydroxyacyl-CoA_dehydrogenase_[Agrotis_segetum]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006631 P fatty acid metabolic process
GO:0006637 P acyl-CoA metabolic process
GO:0008033 P tRNA processing
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008205 P ecdysone metabolic process
GO:0008209 P androgen metabolic process
GO:0008210 P estrogen metabolic process
GO:0016229 F steroid dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0018454 F acetoacetyl-CoA reductase activity
GO:0030283 F testosterone dehydrogenase [NAD(P)] activity
GO:0047015 F 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity
GO:0047022 F 7-beta-hydroxysteroid dehydrogenase (NADP+) activity
GO:0047035 F testosterone dehydrogenase (NAD+) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:20.89 TPM:13.33
1812 A_SariMSG_c12096_g1_i2
307bp
3-hydroxyacyl-CoA_dehydrogenase_[Bombyx_mori]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0008033 P tRNA processing
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030283 F testosterone dehydrogenase [NAD(P)] activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0047015 F 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
1813 A_SariMSG_c12097_g1_i1
224bp
phosphatidylethanolamine_binding_protein_isoform_1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008289 F lipid binding
FPKM:0.00 TPM:0.00
1814 A_SariMSG_c12097_g1_i2
286bp
phosphatidylethanolamine_binding_protein_isoform_1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008289 F lipid binding
FPKM:2.27 TPM:1.45
1815 A_SariMSG_c12098_g1_i1
557bp
jmjC_domain-containing_histone_demethylation_protein_1_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0019005 C SCF ubiquitin ligase complex
GO:0019233 P sensory perception of pain
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031519 C PcG protein complex
GO:0033522 P histone H2A ubiquitination
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
FPKM:3.20 TPM:2.04
1816 A_SariMSG_c12099_g1_i1
805bp
Protein_phosphatase_1_regulatory_inhibitor_subunit_16B_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0008599 F protein phosphatase regulator activity
GO:0016020 C membrane
GO:0050790 P regulation of catalytic activity
FPKM:2.27 TPM:1.45
1817 A_SariMSG_c120_g1_i1
387bp
heme_transporter_hrg1-B-like_isoform_X2_[Helicoverpa_armigera]
FPKM:3.40 TPM:2.17
1818 A_SariMSG_c12100_g1_i1
402bp
nucleic_acid_dioxygenase_ALKBH1_[Helicoverpa_armigera]
GO:0001701 P in utero embryonic development
GO:0001764 P neuron migration
GO:0001890 P placenta development
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005719 C euchromatin
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006307 P DNA dealkylation involved in DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008198 F ferrous iron binding
GO:0010468 P regulation of gene expression
GO:0016491 F oxidoreductase activity
GO:0016829 F lyase activity
GO:0030154 P cell differentiation
GO:0031175 P neuron projection development
GO:0042056 F chemoattractant activity
GO:0042245 P RNA repair
GO:0043524 P negative regulation of neuron apoptotic process
GO:0046872 F metal ion binding
GO:0048589 P developmental growth
GO:0050918 P positive chemotaxis
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070579 F methylcytosine dioxygenase activity
GO:0070989 P oxidative demethylation
GO:0080111 P DNA demethylation
FPKM:1.72 TPM:1.10
1819 A_SariMSG_c12101_g1_i1
680bp
Acidic_nucleoplasmic_DNA-binding_protein_1_[Operophtera_brumata]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
FPKM:1.87 TPM:1.19
1820 A_SariMSG_c12102_g1_i1
265bp
FPKM:2.68 TPM:1.71
1821 A_SariMSG_c12104_g1_i1
270bp
FPKM:0.51 TPM:0.33
1822 A_SariMSG_c12105_g1_i1
524bp
uncharacterized_protein_LOC101738609_isoform_X1_[Bombyx_mori]
FPKM:5.47 TPM:3.49
1823 A_SariMSG_c12107_g1_i1
290bp
FPKM:6.19 TPM:3.95
1824 A_SariMSG_c12108_g1_i1
481bp
josephin-2_[Helicoverpa_armigera]
FPKM:4.12 TPM:2.63
1825 A_SariMSG_c12109_g1_i1
326bp
p53_[Spodoptera_frugiperda]
FPKM:2.70 TPM:1.72
1826 A_SariMSG_c12109_g1_i2
469bp
p53_[Spodoptera_frugiperda]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0043066 P negative regulation of apoptotic process
GO:0044212 F transcription cis-regulatory region binding
GO:0046872 F metal ion binding
GO:0051262 P protein tetramerization
FPKM:1.23 TPM:0.78
1827 A_SariMSG_c1210_g1_i1
240bp
PREDICTED:_putative_nuclease_HARBI1_[Papilio_polytes]
FPKM:2.72 TPM:1.74
1828 A_SariMSG_c12110_g1_i1
246bp
FPKM:0.00 TPM:0.00
1829 A_SariMSG_c12110_g1_i2
312bp
FPKM:1.91 TPM:1.22
1830 A_SariMSG_c12111_g1_i1
608bp
PREDICTED:_HEAT_repeat-containing_protein_1_[Papilio_xuthus]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0009267 P cellular response to starvation
GO:0022008 P neurogenesis
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0045943 P positive regulation of transcription by RNA polymerase I
FPKM:9.34 TPM:5.96
previous next from show/50247

- SilkBase 1999-2023 -