SearchView

Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

151

A_SariMSG_c10211_g1_i1

252bp

FPKM:4.83 TPM:3.08

152

A_SariMSG_c10213_g1_i1

469bp

FPKM:3.69 TPM:2.36

153

A_SariMSG_c10215_g1_i1

240bp

cytosolic_purine_5'-nucleotidase_isoform_X4_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003824	F	catalytic activity
GO:0005737	C	cytoplasm
GO:0008152	P	metabolic process
GO:0008253	F	5'-nucleotidase activity
GO:0009117	P	nucleotide metabolic process
GO:0016311	P	dephosphorylation
GO:0016787	F	hydrolase activity
GO:0042802	F	identical protein binding
GO:0046040	P	IMP metabolic process
GO:0046085	P	adenosine metabolic process
GO:0046872	F	metal ion binding

FPKM:2.04 TPM:1.30

154

A_SariMSG_c10219_g1_i1

487bp

ATP-dependent_RNA_helicase_DHX36_isoform_X2_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000781	C	chromosome, telomeric region
GO:0001047	F	core promoter sequence-specific DNA binding
GO:0001503	P	ossification
GO:0002151	F	G-quadruplex RNA binding
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0003725	F	double-stranded RNA binding
GO:0004004	F	RNA helicase activity
GO:0004386	F	helicase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006396	P	RNA processing
GO:0008026	F	helicase activity
GO:0008094	F	ATP-dependent activity, acting on DNA
GO:0009615	P	response to virus
GO:0010501	P	RNA secondary structure unwinding
GO:0016787	F	hydrolase activity
GO:0032206	P	positive regulation of telomere maintenance
GO:0032481	P	positive regulation of type I interferon production
GO:0042826	F	histone deacetylase binding
GO:0043330	P	response to exogenous dsRNA
GO:0044212	F	transcription cis-regulatory region binding
GO:0044822	F	RNA binding
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0051880	F	G-quadruplex DNA binding
GO:0070062	C	extracellular exosome

FPKM:1.84 TPM:1.17

155

A_SariMSG_c1021_g1_i1

291bp

FPKM:3.95 TPM:2.52

156

A_SariMSG_c10220_g1_i1

267bp

FPKM:3.17 TPM:2.02

157

A_SariMSG_c10222_g1_i1

227bp

chitin_synthase_B_[Helicoverpa_armigera]

GO:0000131	C	incipient cellular bud site
GO:0004100	F	chitin synthase activity
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0005935	C	cellular bud neck
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016740	F	transferase activity
GO:0016757	F	glycosyltransferase activity
GO:0016758	F	hexosyltransferase activity
GO:0030435	P	sporulation resulting in formation of a cellular spore
GO:0043332	C	mating projection tip
GO:0045009	C	chitosome
GO:0071555	P	cell wall organization

FPKM:1.58 TPM:1.01

158

A_SariMSG_c10223_g1_i1

515bp

FPKM:5.77 TPM:3.68

159

A_SariMSG_c10224_g1_i1

1006bp

uncharacterized_protein_LOC101742095_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005125	F	cytokine activity
GO:0005575	C	cellular_component
GO:0005615	C	extracellular space
GO:0006935	P	chemotaxis
GO:0008150	P	biological_process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane

FPKM:33.24 TPM:21.22

160

A_SariMSG_c10225_g1_i1

214bp

FPKM:5.60 TPM:3.58

161

A_SariMSG_c10226_g1_i1

408bp

FPKM:3.36 TPM:2.15

162

A_SariMSG_c10229_g1_i1

288bp

neuroglobin_[Bombyx_mori]

GO:0001666	P	response to hypoxia
GO:0005344	F	oxygen carrier activity
GO:0005737	C	cytoplasm
GO:0006810	P	transport
GO:0015671	P	oxygen transport
GO:0019825	F	oxygen binding
GO:0020037	F	heme binding
GO:0043204	C	perikaryon
GO:0046872	F	metal ion binding