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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1291 A_SariMSG_c11580_g1_i1
621bp
DNA-directed_RNA_polymerase_subunit_6-like_protein_[Bombyx_mori]
GO:0001054 F RNA polymerase I activity
GO:0001055 F RNA polymerase II activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0006366 P transcription by RNA polymerase II
GO:0006383 P transcription by RNA polymerase III
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
FPKM:28.56 TPM:18.23
1292 A_SariMSG_c11582_g1_i1
216bp
FPKM:7.24 TPM:4.62
1293 A_SariMSG_c11582_g2_i1
329bp
FPKM:2.08 TPM:1.33
1294 A_SariMSG_c11583_g1_i1
246bp
FPKM:3.84 TPM:2.45
1295 A_SariMSG_c11588_g1_i1
327bp
FPKM:1.05 TPM:0.67
1296 A_SariMSG_c11589_g1_i1
233bp
PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.21 TPM:1.41
1297 A_SariMSG_c11590_g1_i1
296bp
putative_cell_cycle-associated_protein_[Operophtera_brumata]
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005886 C plasma membrane
GO:0008535 P respiratory chain complex IV assembly
GO:0042774 P plasma membrane ATP synthesis coupled electron transport
GO:0044822 F RNA binding
GO:1902600 P proton transmembrane transport
FPKM:5.51 TPM:3.52
1298 A_SariMSG_c11591_g1_i1
411bp
FPKM:6.19 TPM:3.95
1299 A_SariMSG_c11593_g1_i1
290bp
FPKM:0.89 TPM:0.57
1300 A_SariMSG_c11595_g1_i1
445bp
FPKM:6.30 TPM:4.02
1301 A_SariMSG_c11598_g1_i1
860bp
FPKM:38.33 TPM:24.46
1302 A_SariMSG_c11599_g1_i1
237bp
FPKM:9.14 TPM:5.83
1303 A_SariMSG_c1159_g1_i1
250bp
FPKM:0.00 TPM:0.00
1304 A_SariMSG_c115_g1_i1
247bp
uncharacterized_protein_LOC105841592_[Bombyx_mori]
FPKM:10.77 TPM:6.88
1305 A_SariMSG_c11601_g1_i1
311bp
PREDICTED:_sex_peptide_receptor-like_[Amyelois_transitella]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046983 F protein dimerization activity
FPKM:3.08 TPM:1.96
1306 A_SariMSG_c11602_g1_i1
673bp
kielin/chordin-like_protein_isoform_X1_[Bombyx_mori]
FPKM:4.15 TPM:2.65
1307 A_SariMSG_c11604_g1_i1
425bp
putative_DNA_helicase_Ino80_[Helicoverpa_armigera]
FPKM:3.15 TPM:2.01
1308 A_SariMSG_c11605_g1_i1
248bp
FPKM:1.88 TPM:1.20
1309 A_SariMSG_c11606_g1_i1
212bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1310 A_SariMSG_c11609_g1_i1
224bp
FPKM:4.91 TPM:3.13
1311 A_SariMSG_c1160_g1_i1
268bp
Zinc_finger_protein_[Operophtera_brumata]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0015630 C microtubule cytoskeleton
GO:0046872 F metal ion binding
FPKM:2.62 TPM:1.67
1312 A_SariMSG_c11611_g1_i1
350bp
PREDICTED:_chromatin_complexes_subunit_BAP18-like_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0071339 C MLL1 complex
FPKM:1.35 TPM:0.86
1313 A_SariMSG_c11611_g1_i2
479bp
PREDICTED:_chromatin_complexes_subunit_BAP18-like_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0071339 C MLL1 complex
FPKM:2.00 TPM:1.28
1314 A_SariMSG_c11613_g1_i1
742bp
PREDICTED:_LIM_domain_kinase_1_[Papilio_polytes]
FPKM:2.09 TPM:1.34
1315 A_SariMSG_c11614_g1_i1
1007bp
ras-related_protein_Rab-8A_isoform_X2_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007409 P axonogenesis
GO:0008021 C synaptic vesicle
GO:0008152 P metabolic process
GO:0009306 P protein secretion
GO:0014069 C postsynaptic density
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0019003 F GDP binding
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030140 C trans-Golgi network transport vesicle
GO:0030425 C dendrite
GO:0030659 C cytoplasmic vesicle membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031489 F myosin V binding
GO:0031513 C non-motile cilium
GO:0032869 P cellular response to insulin stimulus
GO:0032880 P regulation of protein localization
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042593 P glucose homeostasis
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0045335 C phagocytic vesicle
GO:0046326 P positive regulation of glucose import
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048210 P Golgi vesicle fusion to target membrane
GO:0051223 P regulation of protein transport
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0061024 P membrane organization
GO:0070062 C extracellular exosome
GO:0072372 C cilium
GO:0072659 P protein localization to plasma membrane
GO:0097546 C ciliary base
FPKM:36.53 TPM:23.31
1316 A_SariMSG_c11615_g1_i1
570bp
FPKM:3.98 TPM:2.54
1317 A_SariMSG_c11616_g1_i1
435bp
solute_carrier_organic_anion_transporter_family_member_4A1_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015347 F sodium-independent organic anion transmembrane transporter activity
GO:0015349 F thyroid hormone transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042403 P thyroid hormone metabolic process
GO:0043252 P sodium-independent organic anion transport
GO:0070327 P thyroid hormone transport
FPKM:1.09 TPM:0.69
1318 A_SariMSG_c11617_g1_i1
257bp
FPKM:5.76 TPM:3.68
1319 A_SariMSG_c11618_g1_i1
295bp
FPKM:11.10 TPM:7.08
1320 A_SariMSG_c11619_g1_i1
458bp
FPKM:45.47 TPM:29.02
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