SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
91 A_SariASG_c10165_g1_i1
227bp
PREDICTED:_uncharacterized_protein_LOC105181477_isoform_X1_[Harpegnathos_saltator]
FPKM:2.42 TPM:2.35
92 A_SariASG_c10166_g1_i1
218bp
FPKM:2.04 TPM:1.97
93 A_SariASG_c10169_g1_i1
246bp
FPKM:2.95 TPM:2.85
94 A_SariASG_c10169_g1_i2
284bp
FPKM:0.00 TPM:0.00
95 A_SariASG_c1016_g1_i1
324bp
FPKM:2.44 TPM:2.37
96 A_SariASG_c10170_g1_i1
269bp
PREDICTED:_zinc_finger_protein_878-like_isoform_X2_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:1.59 TPM:1.54
97 A_SariASG_c10172_g1_i1
355bp
PREDICTED:_uncharacterized_protein_LOC106135765_[Amyelois_transitella]
FPKM:3.68 TPM:3.56
98 A_SariASG_c10177_g1_i1
257bp
FPKM:0.88 TPM:0.86
99 A_SariASG_c10178_g1_i1
437bp
FPKM:39.98 TPM:38.71
100 A_SariASG_c10178_g1_i2
418bp
FPKM:0.00 TPM:0.00
101 A_SariASG_c10179_g1_i1
267bp
FPKM:3.23 TPM:3.13
102 A_SariASG_c1017_g1_i1
219bp
FPKM:0.67 TPM:0.65
103 A_SariASG_c10180_g1_i1
268bp
FPKM:4.01 TPM:3.88
104 A_SariASG_c10184_g1_i1
288bp
FPKM:1.37 TPM:1.33
105 A_SariASG_c10185_g1_i1
312bp
FPKM:2.33 TPM:2.26
106 A_SariASG_c10186_g1_i1
263bp
FPKM:1.26 TPM:1.22
107 A_SariASG_c10187_g1_i1
204bp
FPKM:1.66 TPM:1.61
108 A_SariASG_c10190_g1_i1
288bp
FPKM:1.03 TPM:1.00
109 A_SariASG_c10192_g1_i1
404bp
FPKM:1.85 TPM:1.79
110 A_SariASG_c10193_g1_i1
209bp
FPKM:8.48 TPM:8.21
111 A_SariASG_c10194_g1_i1
371bp
FPKM:4.48 TPM:4.34
112 A_SariASG_c10196_g1_i1
361bp
FPKM:1.79 TPM:1.73
113 A_SariASG_c10198_g1_i1
353bp
FPKM:5.59 TPM:5.41
114 A_SariASG_c10199_g1_i1
270bp
FPKM:1.97 TPM:1.91
115 A_SariASG_c101_g1_i1
270bp
cytochrome_P450_monooxygenase_CYP321F5_[Cnaphalocrocis_medinalis]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.15 TPM:3.05
116 A_SariASG_c10200_g1_i1
584bp
FPKM:1.73 TPM:1.67
117 A_SariASG_c10204_g1_i1
310bp
40S_ribosomal_protein_S17_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:1.48 TPM:1.43
118 A_SariASG_c10206_g1_i1
273bp
FPKM:0.77 TPM:0.74
119 A_SariASG_c10208_g1_i1
207bp
FPKM:0.79 TPM:0.77
120 A_SariASG_c10209_g1_i1
383bp
FPKM:2.63 TPM:2.54
previous next from show/68433

- SilkBase 1999-2023 -