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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
811 A_SariASG_c11451_g1_i1
348bp
Neurabin-1_[Operophtera_brumata]
FPKM:1.43 TPM:1.38
812 A_SariASG_c11452_g1_i1
276bp
ATP-binding_cassette_sub-family_B_member_3,_partial_[Danaus_plexippus_plexippus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.25 TPM:2.18
813 A_SariASG_c11456_g1_i1
236bp
PREDICTED:_40S_ribosomal_protein_S4-like_[Bison_bison_bison]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0005925 C focal adhesion
GO:0006412 P translation
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0015935 C small ribosomal subunit
GO:0016020 C membrane
GO:0019843 F rRNA binding
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0070062 C extracellular exosome
FPKM:3.27 TPM:3.17
814 A_SariASG_c11457_g1_i1
494bp
FPKM:2.51 TPM:2.43
815 A_SariASG_c11457_g1_i2
575bp
FPKM:0.18 TPM:0.18
816 A_SariASG_c11458_g1_i1
278bp
FPKM:90.93 TPM:88.06
817 A_SariASG_c11459_g1_i1
274bp
PREDICTED:_uncharacterized_protein_LOC106136237_[Amyelois_transitella]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0097374 P sensory neuron axon guidance
FPKM:5.72 TPM:5.54
818 A_SariASG_c11460_g1_i1
277bp
FPKM:1.86 TPM:1.80
819 A_SariASG_c11461_g1_i1
219bp
FPKM:1.34 TPM:1.30
820 A_SariASG_c11463_g1_i1
308bp
FPKM:1.50 TPM:1.45
821 A_SariASG_c11464_g1_i1
213bp
FPKM:4.36 TPM:4.23
822 A_SariASG_c11465_g1_i1
335bp
Uncharacterized_protein_T06_11017_[Trichinella_sp._T6]
FPKM:0.51 TPM:0.49
823 A_SariASG_c11466_g1_i1
340bp
FPKM:21.36 TPM:20.69
824 A_SariASG_c11467_g1_i1
342bp
FPKM:9.09 TPM:8.81
825 A_SariASG_c11468_g1_i1
243bp
FPKM:3.04 TPM:2.94
826 A_SariASG_c11469_g1_i1
321bp
FPKM:3.04 TPM:2.94
827 A_SariASG_c11471_g1_i1
230bp
FPKM:1.17 TPM:1.13
828 A_SariASG_c11472_g1_i1
896bp
PREDICTED:_ubiquitin-conjugating_enzyme_E2_C_[Amyelois_transitella]
GO:0000151 C ubiquitin ligase complex
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0010458 P exit from mitosis
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031616 C spindle pole centrosome
GO:0031625 F ubiquitin protein ligase binding
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2000600 P positive regulation of cellular protein catabolic process
FPKM:49.48 TPM:47.92
829 A_SariASG_c11472_g1_i2
766bp
PREDICTED:_ubiquitin-conjugating_enzyme_E2_C_[Plutella_xylostella]
GO:0000151 C ubiquitin ligase complex
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0010458 P exit from mitosis
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031616 C spindle pole centrosome
GO:0031625 F ubiquitin protein ligase binding
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2000600 P positive regulation of cellular protein catabolic process
FPKM:3.93 TPM:3.80
830 A_SariASG_c11476_g1_i1
318bp
FPKM:2.53 TPM:2.45
831 A_SariASG_c11477_g1_i1
366bp
Zinc_finger_protein_208_[Larimichthys_crocea]
FPKM:1.96 TPM:1.90
832 A_SariASG_c11479_g1_i1
481bp
PREDICTED:_U6_snRNA-associated_Sm-like_protein_LSm5_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
FPKM:57.76 TPM:55.93
833 A_SariASG_c11482_g1_i1
237bp
FPKM:6.48 TPM:6.27
834 A_SariASG_c11483_g1_i1
304bp
FPKM:1.23 TPM:1.19
835 A_SariASG_c11484_g1_i1
284bp
glutathione_S-transferase_epsilon_3_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
FPKM:1.41 TPM:1.37
836 A_SariASG_c11486_g1_i1
524bp
FPKM:1.76 TPM:1.70
837 A_SariASG_c11487_g1_i1
209bp
FPKM:1.54 TPM:1.49
838 A_SariASG_c1148_g1_i1
219bp
FPKM:1.34 TPM:1.30
839 A_SariASG_c11494_g1_i1
314bp
FPKM:2.31 TPM:2.23
840 A_SariASG_c11496_g1_i1
230bp
FPKM:12.86 TPM:12.45
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