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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

4771

A_SariASG_c17821_g1_i1

266bp

FPKM:1.51 TPM:1.47

4772

A_SariASG_c17821_g1_i2

245bp

FPKM:0.64 TPM:0.62

4773

A_SariASG_c17822_g1_i1

664bp

cytoplasmic_dynein_2_heavy_chain_1_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003774	F	cytoskeletal motor activity
GO:0003777	F	microtubule motor activity
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005794	C	Golgi apparatus
GO:0005856	C	cytoskeleton
GO:0005868	C	cytoplasmic dynein complex
GO:0005874	C	microtubule
GO:0005886	C	plasma membrane
GO:0005929	C	cilium
GO:0005930	C	axoneme
GO:0007018	P	microtubule-based movement
GO:0007030	P	Golgi organization
GO:0007275	P	multicellular organism development
GO:0007368	P	determination of left/right symmetry
GO:0007507	P	heart development
GO:0008105	P	protein localization
GO:0009953	P	dorsal/ventral pattern formation
GO:0016020	C	membrane
GO:0016485	P	protein processing
GO:0016887	F	ATP hydrolysis activity
GO:0021522	P	spinal cord motor neuron differentiation
GO:0030030	P	cell projection organization
GO:0030182	P	neuron differentiation
GO:0030286	C	dynein complex
GO:0030326	P	embryonic limb morphogenesis
GO:0030900	P	forebrain development
GO:0031512	C	motile cilium
GO:0035721	P	intraciliary retrograde transport
GO:0042384	P	cilium assembly
GO:0042995	C	cell projection
GO:0045177	C	apical part of cell
GO:0045880	P	positive regulation of smoothened signaling pathway
GO:0060271	P	cilium assembly
GO:0060976	P	coronary vasculature development
GO:0070062	C	extracellular exosome

FPKM:3.56 TPM:3.44

4774

A_SariASG_c17823_g1_i1

315bp

FPKM:2.00 TPM:1.94

4775

A_SariASG_c17824_g1_i1

218bp

FPKM:2.04 TPM:1.97

4776

A_SariASG_c17826_g1_i1

354bp

FPKM:5.32 TPM:5.15

4777

A_SariASG_c17828_g1_i1

993bp

succinate_dehydrogenase_cytochrome_b560_subunit,_mitochondrial_[Bombyx_mori]

GO:0000104	F	succinate dehydrogenase activity
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0005749	C	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0006099	P	tricarboxylic acid cycle
GO:0006121	P	mitochondrial electron transport, succinate to ubiquinone
GO:0009055	F	electron transfer activity
GO:0009060	P	aerobic respiration
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016627	F	oxidoreductase activity, acting on the CH-CH group of donors
GO:0020037	F	heme binding
GO:0045273	C	respiratory chain complex II
GO:0045281	C	succinate dehydrogenase complex
GO:0046872	F	metal ion binding
GO:0055114	P	obsolete oxidation-reduction process

FPKM:14.59 TPM:14.13

4778

A_SariASG_c17828_g1_i2

908bp

succinate_dehydrogenase_cytochrome_b560_subunit,_mitochondrial_[Bombyx_mori]

GO:0000104	F	succinate dehydrogenase activity
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0005749	C	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0006099	P	tricarboxylic acid cycle
GO:0006121	P	mitochondrial electron transport, succinate to ubiquinone
GO:0009055	F	electron transfer activity
GO:0009060	P	aerobic respiration
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016627	F	oxidoreductase activity, acting on the CH-CH group of donors
GO:0020037	F	heme binding
GO:0045273	C	respiratory chain complex II
GO:0045281	C	succinate dehydrogenase complex
GO:0046872	F	metal ion binding
GO:0055114	P	obsolete oxidation-reduction process

FPKM:206.29 TPM:199.77

4779

A_SariASG_c1782_g1_i1

405bp

FPKM:2.03 TPM:1.97

4780

A_SariASG_c17830_g1_i1

559bp

polyprotein_[Operophtera_brumata]

FPKM:2.29 TPM:2.22

4781

A_SariASG_c17834_g1_i1

664bp

uncharacterized_protein_LOC110374285_[Helicoverpa_armigera]

FPKM:2.28 TPM:2.21

4782

A_SariASG_c17835_g1_i1

204bp

FPKM:7.48 TPM:7.25

4783

A_SariASG_c17837_g1_i1

321bp

FPKM:2.21 TPM:2.14

4784

A_SariASG_c1783_g1_i1

290bp

FPKM:3.72 TPM:3.60

4785

A_SariASG_c17840_g1_i1

524bp

CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]

GO:0005215	F	transporter activity
GO:0005622	C	intracellular anatomical structure
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0005802	C	trans-Golgi network
GO:0006810	P	transport
GO:0007040	P	lysosome organization
GO:0008289	F	lipid binding
GO:0016020	C	membrane
GO:0030136	C	clathrin-coated vesicle
GO:0031410	C	cytoplasmic vesicle
GO:0031901	C	early endosome membrane
GO:0080025	F	phosphatidylinositol-3,5-bisphosphate binding