SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4141 A_SariASG_c16990_g2_i1
482bp
FPKM:21.65 TPM:20.96
4142 A_SariASG_c16992_g1_i1
524bp
PREDICTED:_A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_isoform_X1_[Amyelois_transitella]
FPKM:2.38 TPM:2.31
4143 A_SariASG_c16993_g1_i1
304bp
macoilin_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007420 P brain development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0031965 C nuclear membrane
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0044306 C neuron projection terminus
GO:0045202 C synapse
FPKM:5.83 TPM:5.65
4144 A_SariASG_c16996_g1_i1
289bp
FPKM:3.06 TPM:2.97
4145 A_SariASG_c16997_g1_i1
303bp
FPKM:2.78 TPM:2.69
4146 A_SariASG_c16998_g1_i1
501bp
FPKM:16.45 TPM:15.93
4147 A_SariASG_c16999_g1_i1
235bp
FPKM:4.41 TPM:4.28
4148 A_SariASG_c1699_g1_i1
268bp
PREDICTED:_prostaglandin_reductase_1_[Microplitis_demolitor]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.00 TPM:1.94
4149 A_SariASG_c169_g1_i1
311bp
kinesin-like_protein_Klp68D_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
FPKM:0.88 TPM:0.85
4150 A_SariASG_c16_g1_i1
202bp
FPKM:3.43 TPM:3.32
4151 A_SariASG_c17000_g1_i1
1586bp
nucleoporin_Nup43_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0051028 P mRNA transport
GO:0051301 P cell division
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
FPKM:28.81 TPM:27.90
4152 A_SariASG_c17001_g1_i1
694bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
FPKM:1.55 TPM:1.50
4153 A_SariASG_c17001_g1_i2
517bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
4154 A_SariASG_c17003_g1_i1
374bp
PREDICTED:_clathrin_light_chain_isoform_X1_[Papilio_machaon]
FPKM:1.68 TPM:1.63
4155 A_SariASG_c17005_g1_i1
301bp
FPKM:6.89 TPM:6.67
4156 A_SariASG_c17006_g1_i1
650bp
PREDICTED:_23_kDa_integral_membrane_protein-like_[Papilio_xuthus]
FPKM:2.81 TPM:2.72
4157 A_SariASG_c17009_g1_i1
3080bp
succinate_dehydrogenase_[ubiquinone]_flavoprotein_subunit,_mitochondrial_[Bombyx_mori]
GO:0004776 F succinate-CoA ligase (GDP-forming) activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0006099 P tricarboxylic acid cycle
GO:0008177 F succinate dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0022900 P electron transport chain
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:92.23 TPM:89.31
4158 A_SariASG_c1700_g1_i1
258bp
FPKM:0.88 TPM:0.85
4159 A_SariASG_c17010_g1_i1
376bp
FPKM:2.08 TPM:2.02
4160 A_SariASG_c17012_g1_i1
221bp
FPKM:3.29 TPM:3.19
4161 A_SariASG_c17013_g1_i1
694bp
surfeit_locus_protein_6_homolog_[Helicoverpa_armigera]
FPKM:3.06 TPM:2.97
4162 A_SariASG_c17013_g1_i2
958bp
surfeit_locus_protein_6_homolog_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007419 P ventral cord development
GO:0022008 P neurogenesis
GO:0042254 P ribosome biogenesis
FPKM:34.08 TPM:33.00
4163 A_SariASG_c17017_g1_i1
283bp
FPKM:11.03 TPM:10.68
4164 A_SariASG_c17017_g2_i1
316bp
FPKM:5.12 TPM:4.96
4165 A_SariASG_c17018_g1_i1
249bp
FPKM:10.01 TPM:9.69
4166 A_SariASG_c17020_g1_i1
310bp
FPKM:9.16 TPM:8.87
4167 A_SariASG_c17021_g1_i1
464bp
FPKM:17.36 TPM:16.81
4168 A_SariASG_c17022_g1_i1
575bp
FPKM:3.09 TPM:2.99
4169 A_SariASG_c17024_g1_i1
2591bp
nucleolar_complex_protein_3_homolog_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
FPKM:23.44 TPM:22.70
4170 A_SariASG_c17025_g1_i1
330bp
NADH-ubiquinone_oxidoreductase_subunit_[Danaus_plexippus_plexippus]
GO:0002020 F protease binding
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016491 F oxidoreductase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0048038 F quinone binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0097060 C synaptic membrane
FPKM:2.62 TPM:2.54
previous next from show/68433

- SilkBase 1999-2023 -