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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3991 A_SariASG_c16817_g1_i2
470bp
Zinc_finger_HIT_domain-containing_protein_1_[Danaus_plexippus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000812 C Swr1 complex
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0031063 P regulation of histone deacetylation
GO:0031491 F nucleosome binding
GO:0042129 P regulation of T cell proliferation
GO:0042826 F histone deacetylase binding
GO:0043486 P histone exchange
GO:0046872 F metal ion binding
GO:0070317 P negative regulation of G0 to G1 transition
FPKM:0.00 TPM:0.00
3992 A_SariASG_c16818_g1_i1
539bp
FPKM:7.96 TPM:7.71
3993 A_SariASG_c16820_g1_i1
1873bp
PREDICTED:_serine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:43.59 TPM:42.21
3994 A_SariASG_c16822_g1_i1
432bp
Tyrosine-protein_kinase_Src64B_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008335 P female germline ring canal stabilization
GO:0008355 P olfactory learning
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016319 P mushroom body development
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030046 P parallel actin filament bundle assembly
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036058 P filtration diaphragm assembly
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045860 P positive regulation of protein kinase activity
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0048477 P oogenesis
GO:0090136 P epithelial cell-cell adhesion
FPKM:2.33 TPM:2.26
3995 A_SariASG_c16823_g1_i1
623bp
PREDICTED:_small_integral_membrane_protein_4_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:84.64 TPM:81.96
3996 A_SariASG_c16824_g1_i1
455bp
FPKM:2.93 TPM:2.84
3997 A_SariASG_c16825_g1_i1
484bp
FPKM:2.76 TPM:2.68
3998 A_SariASG_c16825_g1_i2
347bp
FPKM:0.56 TPM:0.54
3999 A_SariASG_c16827_g1_i1
1926bp
uncharacterized_protein_LOC101745890_[Bombyx_mori]
FPKM:31.78 TPM:30.78
4000 A_SariASG_c16827_g1_i2
1833bp
uncharacterized_protein_LOC101745890_[Bombyx_mori]
FPKM:118.84 TPM:115.08
4001 A_SariASG_c16828_g1_i1
244bp
FPKM:1.50 TPM:1.46
4002 A_SariASG_c1682_g1_i1
453bp
leucine-rich_repeat_protein_soc-2_homolog_[Helicoverpa_armigera]
FPKM:2.79 TPM:2.70
4003 A_SariASG_c16830_g1_i1
259bp
FPKM:0.87 TPM:0.84
4004 A_SariASG_c16831_g1_i1
211bp
FPKM:1.50 TPM:1.45
4005 A_SariASG_c16832_g1_i1
461bp
FPKM:5.29 TPM:5.12
4006 A_SariASG_c16833_g1_i1
844bp
uncharacterized_protein_LOC110371625_[Helicoverpa_armigera]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
FPKM:25.97 TPM:25.15
4007 A_SariASG_c16836_g1_i1
345bp
FPKM:5.56 TPM:5.39
4008 A_SariASG_c16838_g1_i1
285bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106135138_[Amyelois_transitella]
FPKM:1.05 TPM:1.02
4009 A_SariASG_c16839_g1_i1
370bp
kinesin-like_protein_KIF21B_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042995 C cell projection
FPKM:2.78 TPM:2.70
4010 A_SariASG_c16840_g1_i1
1373bp
PREDICTED:_dnaJ_homolog_subfamily_B_member_11_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016556 P mRNA modification
GO:0032781 P positive regulation of ATP-dependent activity
GO:0034663 C endoplasmic reticulum chaperone complex
GO:0051082 F unfolded protein binding
FPKM:50.38 TPM:48.79
4011 A_SariASG_c16844_g1_i1
587bp
probable_pterin-4-alpha-carbinolamine_dehydratase_[Bombyx_mori]
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0008124 F 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
GO:0016829 F lyase activity
FPKM:54.19 TPM:52.48
4012 A_SariASG_c16845_g1_i1
290bp
FPKM:4.73 TPM:4.58
4013 A_SariASG_c16847_g1_i1
416bp
FPKM:4.24 TPM:4.11
4014 A_SariASG_c16849_g1_i1
252bp
peroxidase_isoform_X1_[Bombyx_mori]
FPKM:1.39 TPM:1.34
4015 A_SariASG_c16850_g1_i1
211bp
PREDICTED:_zinc_finger_BED_domain-containing_protein_4-like_[Hydra_vulgaris]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
FPKM:2.99 TPM:2.90
4016 A_SariASG_c16851_g1_i1
651bp
uncharacterized_protein_LOC110384222_[Helicoverpa_armigera]
FPKM:0.00 TPM:0.00
4017 A_SariASG_c16851_g1_i2
663bp
uncharacterized_protein_LOC110384222_[Helicoverpa_armigera]
FPKM:2.38 TPM:2.30
4018 A_SariASG_c16852_g1_i1
1656bp
PREDICTED:_probable_medium-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_isoform_X1_[Papilio_polytes]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005811 C lipid droplet
GO:0005875 C microtubule associated complex
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070991 F medium-chain-acyl-CoA dehydrogenase activity
FPKM:47.67 TPM:46.16
4019 A_SariASG_c16853_g1_i1
317bp
FPKM:4.53 TPM:4.38
4020 A_SariASG_c16855_g1_i1
211bp
FPKM:2.99 TPM:2.90
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