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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

3391

A_SariASG_c15989_g1_i1

230bp

FPKM:1.75 TPM:1.70

3392

A_SariASG_c15990_g1_i1

369bp

hypothetical_protein,_partial_[Pseudomonas_fluorescens]

FPKM:3.23 TPM:3.13

3393

A_SariASG_c15993_g1_i1

283bp

FPKM:3.56 TPM:3.45

3394

A_SariASG_c15994_g1_i1

462bp

FPKM:2.11 TPM:2.04

3395

A_SariASG_c15996_g1_i1

227bp

CUE_domain-containing_protein_2_[Bombyx_mori]

GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0010936	P	negative regulation of macrophage cytokine production
GO:0031965	C	nuclear membrane
GO:1900016	P	negative regulation of cytokine production involved in inflammatory response

FPKM:7.87 TPM:7.63

3396

A_SariASG_c15998_g1_i1

237bp

FPKM:1.08 TPM:1.05

3397

A_SariASG_c16000_g1_i1

408bp

FPKM:0.91 TPM:0.88

3398

A_SariASG_c16001_g1_i1

265bp

FPKM:3.29 TPM:3.19

3399

A_SariASG_c16005_g1_i1

312bp

PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Nicrophorus_vespilloides]

GO:0003964	F	RNA-directed DNA polymerase activity
GO:0005575	C	cellular_component
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006313	P	transposition, DNA-mediated
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity

FPKM:2.33 TPM:2.26

3400

A_SariASG_c16007_g1_i1

222bp

FPKM:9.67 TPM:9.36

3401

A_SariASG_c16008_g1_i1

815bp

FPKM:3.52 TPM:3.41

3402

A_SariASG_c16009_g1_i1

230bp

FPKM:2.34 TPM:2.26

3403

A_SariASG_c16011_g1_i1

324bp

FPKM:4.34 TPM:4.21

3404

A_SariASG_c16012_g1_i1

320bp

FPKM:2.78 TPM:2.69

3405

A_SariASG_c16013_g1_i1

488bp

FPKM:59.33 TPM:57.46

3406

A_SariASG_c16014_g1_i1

210bp

FPKM:1.52 TPM:1.47

3407

A_SariASG_c16015_g1_i1

804bp

PREDICTED:_exosome_complex_component_RRP46_[Amyelois_transitella]

GO:0000176	C	nuclear exosome (RNase complex)
GO:0000177	C	cytoplasmic exosome (RNase complex)
GO:0000178	C	exosome (RNase complex)
GO:0003674	F	molecular_function
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0006364	P	rRNA processing
GO:0006401	P	RNA catabolic process
GO:0016075	P	rRNA catabolic process
GO:0031125	P	rRNA 3'-end processing
GO:0034427	P	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475	P	U4 snRNA 3'-end processing
GO:0035327	C	euchromatin
GO:0043928	P	exonucleolytic catabolism of deadenylated mRNA
GO:0045006	P	DNA deamination
GO:0051607	P	defense response to virus
GO:0071028	P	nuclear mRNA surveillance
GO:0071051	P	polyadenylation-dependent snoRNA 3'-end processing

FPKM:40.59 TPM:39.31

3408

A_SariASG_c16016_g1_i1

663bp

FPKM:42.02 TPM:40.70

3409

A_SariASG_c16018_g1_i1

233bp

FPKM:2.25 TPM:2.18

3410

A_SariASG_c16019_g1_i1

209bp

Ribosomal_protein_L17,_partial_[Operophtera_brumata]

GO:0003735	F	structural constituent of ribosome
GO:0005622	C	intracellular anatomical structure
GO:0005840	C	ribosome
GO:0006412	P	translation
GO:0015934	C	large ribosomal subunit
GO:0030529	C	ribonucleoprotein complex

FPKM:1.54 TPM:1.49

3411

A_SariASG_c16020_g1_i1

350bp

FPKM:1.18 TPM:1.14

3412

A_SariASG_c16021_g1_i1

351bp

FPKM:3.75 TPM:3.64

3413

A_SariASG_c16022_g1_i1

239bp

FPKM:0.00 TPM:0.00

3414

A_SariASG_c16024_g1_i1

339bp

FPKM:2.50 TPM:2.42

3415

A_SariASG_c16025_g1_i1

391bp

cadherin-related_tumor_suppressor_[Helicoverpa_armigera]

GO:0000904	P	cell morphogenesis involved in differentiation
GO:0001736	P	establishment of planar polarity
GO:0001737	P	establishment of imaginal disc-derived wing hair orientation
GO:0004872	F	signaling receptor activity
GO:0005509	F	calcium ion binding
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0005886	C	plasma membrane
GO:0005887	C	integral component of plasma membrane
GO:0007155	P	cell adhesion
GO:0007156	P	homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157	P	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164	P	establishment of tissue polarity
GO:0007446	P	imaginal disc growth
GO:0007447	P	imaginal disc pattern formation
GO:0007476	P	imaginal disc-derived wing morphogenesis
GO:0008283	P	cell population proliferation
GO:0008285	P	negative regulation of cell population proliferation
GO:0009888	P	tissue development
GO:0010629	P	negative regulation of gene expression
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016318	P	ommatidial rotation
GO:0016324	C	apical plasma membrane
GO:0016336	P	establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0016337	P	cell-cell adhesion
GO:0016339	P	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149	P	peptide cross-linking
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0032880	P	regulation of protein localization
GO:0035159	P	regulation of tube length, open tracheal system
GO:0035209	P	pupal development
GO:0035220	P	wing disc development
GO:0035329	P	hippo signaling
GO:0040008	P	regulation of growth
GO:0042067	P	establishment of ommatidial planar polarity
GO:0044331	P	cell-cell adhesion mediated by cadherin
GO:0045198	P	establishment of epithelial cell apical/basal polarity
GO:0045296	F	cadherin binding
GO:0045317	P	equator specification
GO:0045570	P	regulation of imaginal disc growth
GO:0045571	P	negative regulation of imaginal disc growth
GO:0045926	P	negative regulation of growth
GO:0046620	P	regulation of organ growth
GO:0048105	P	establishment of body hair planar orientation
GO:0050839	F	cell adhesion molecule binding
GO:0090176	P	microtubule cytoskeleton organization involved in establishment of planar polarity