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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3331 A_SariASG_c15900_g1_i1
233bp
FPKM:6.21 TPM:6.01
3332 A_SariASG_c15901_g1_i1
219bp
FPKM:1.34 TPM:1.30
3333 A_SariASG_c15903_g1_i1
251bp
FPKM:0.93 TPM:0.91
3334 A_SariASG_c15906_g1_i1
249bp
FPKM:2.38 TPM:2.31
3335 A_SariASG_c15907_g1_i1
250bp
transcription_elongation_factor_A_protein_1-like,_partial_[Meriones_unguiculatus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0030218 P erythrocyte differentiation
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:1.89 TPM:1.83
3336 A_SariASG_c15909_g1_i1
215bp
FPKM:1.41 TPM:1.37
3337 A_SariASG_c15911_g1_i1
281bp
FPKM:2.17 TPM:2.10
3338 A_SariASG_c15912_g1_i1
319bp
FPKM:1.68 TPM:1.62
3339 A_SariASG_c15913_g1_i1
667bp
PREDICTED:_uncharacterized_protein_LOC106572711_[Salmo_salar]
FPKM:14.96 TPM:14.48
3340 A_SariASG_c15915_g1_i1
212bp
FPKM:1.48 TPM:1.43
3341 A_SariASG_c15916_g1_i1
270bp
FPKM:2.37 TPM:2.29
3342 A_SariASG_c15918_g1_i1
238bp
PREDICTED:_uncharacterized_protein_LOC106130557_[Amyelois_transitella]
FPKM:10.14 TPM:9.82
3343 A_SariASG_c15919_g1_i1
906bp
PREDICTED:_mitochondrial_import_inner_membrane_translocase_subunit_Tim22_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0015266 F protein transmembrane transporter activity
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030943 F mitochondrion targeting sequence binding
GO:0042721 C TIM22 mitochondrial import inner membrane insertion complex
GO:0045039 P protein insertion into mitochondrial inner membrane
FPKM:30.58 TPM:29.62
3344 A_SariASG_c1591_g1_i1
207bp
FPKM:0.79 TPM:0.77
3345 A_SariASG_c15920_g1_i1
468bp
FPKM:1.00 TPM:0.97
3346 A_SariASG_c15924_g1_i1
201bp
FPKM:3.49 TPM:3.38
3347 A_SariASG_c15927_g1_i1
261bp
FPKM:2.98 TPM:2.89
3348 A_SariASG_c15929_g1_i1
234bp
FPKM:1.67 TPM:1.62
3349 A_SariASG_c15930_g1_i1
269bp
FPKM:2.78 TPM:2.69
3350 A_SariASG_c15932_g1_i1
1919bp
PREDICTED:_eukaryotic_translation_initiation_factor_3_subunit_D_isoform_X1_[Amyelois_transitella]
GO:0001731 P formation of translation preinitiation complex
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016282 C eukaryotic 43S preinitiation complex
GO:0033290 C eukaryotic 48S preinitiation complex
FPKM:173.42 TPM:167.93
3351 A_SariASG_c15933_g1_i1
318bp
coiled-coil_domain-containing_protein_170_[Bombyx_mori]
FPKM:1.12 TPM:1.09
3352 A_SariASG_c15935_g1_i1
569bp
PREDICTED:_uncharacterized_protein_LOC106720816_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:1.46 TPM:1.41
3353 A_SariASG_c15937_g1_i1
291bp
FPKM:2.01 TPM:1.95
3354 A_SariASG_c15938_g1_i1
243bp
FPKM:4.56 TPM:4.41
3355 A_SariASG_c15939_g1_i1
223bp
PREDICTED:_uncharacterized_protein_LOC107169740_[Diuraphis_noxia]
FPKM:2.55 TPM:2.47
3356 A_SariASG_c1593_g1_i1
265bp
FPKM:4.52 TPM:4.38
3357 A_SariASG_c15940_g1_i1
453bp
PREDICTED:_uncharacterized_protein_LOC101236095_[Hydra_vulgaris]
FPKM:0.93 TPM:0.90
3358 A_SariASG_c15941_g1_i1
348bp
FPKM:1.91 TPM:1.85
3359 A_SariASG_c15941_g1_i2
251bp
FPKM:0.00 TPM:0.00
3360 A_SariASG_c15942_g1_i1
961bp
PREDICTED:_proteasome_subunit_alpha_type-4_[Papilio_machaon]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008233 F peptidase activity
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0019773 C proteasome core complex, alpha-subunit complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043488 P regulation of mRNA stability
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:70.28 TPM:68.06
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