SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2761 A_SariASG_c14987_g1_i2
369bp
FPKM:6.67 TPM:6.46
2762 A_SariASG_c14989_g1_i1
360bp
FPKM:2.02 TPM:1.96
2763 A_SariASG_c14991_g1_i1
547bp
FPKM:1.54 TPM:1.49
2764 A_SariASG_c14992_g1_i1
246bp
FPKM:1.96 TPM:1.90
2765 A_SariASG_c14993_g1_i1
259bp
FPKM:1.30 TPM:1.26
2766 A_SariASG_c14994_g1_i1
207bp
FPKM:0.00 TPM:0.00
2767 A_SariASG_c14994_g1_i2
270bp
FPKM:0.39 TPM:0.38
2768 A_SariASG_c14996_g1_i1
248bp
FPKM:2.41 TPM:2.33
2769 A_SariASG_c14997_g1_i1
234bp
FPKM:3.35 TPM:3.24
2770 A_SariASG_c14998_g1_i1
210bp
FPKM:5.31 TPM:5.15
2771 A_SariASG_c149_g1_i1
836bp
FPKM:55.76 TPM:53.99
2772 A_SariASG_c14_g1_i1
270bp
reverse_transcriptase,_partial_[Aglia_tau]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.97 TPM:1.91
2773 A_SariASG_c15000_g1_i1
258bp
FPKM:3.94 TPM:3.81
2774 A_SariASG_c15001_g1_i1
1151bp
28S_ribosomal_protein_S35,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
FPKM:72.80 TPM:70.49
2775 A_SariASG_c15002_g1_i1
559bp
FPKM:4.82 TPM:4.67
2776 A_SariASG_c15003_g1_i1
289bp
FPKM:1.36 TPM:1.32
2777 A_SariASG_c15005_g1_i1
231bp
FPKM:4.04 TPM:3.92
2778 A_SariASG_c15006_g1_i1
222bp
FPKM:2.58 TPM:2.50
2779 A_SariASG_c15007_g1_i1
257bp
uncharacterized_protein_LOC110371615_isoform_X3_[Helicoverpa_armigera]
FPKM:5.74 TPM:5.56
2780 A_SariASG_c15008_g1_i1
229bp
FPKM:2.37 TPM:2.29
2781 A_SariASG_c15009_g1_i1
236bp
FPKM:2.18 TPM:2.11
2782 A_SariASG_c1500_g1_i1
267bp
FPKM:1.21 TPM:1.17
2783 A_SariASG_c15010_g1_i1
242bp
FPKM:1.02 TPM:0.99
2784 A_SariASG_c15011_g1_i1
233bp
FPKM:4.52 TPM:4.37
2785 A_SariASG_c15012_g1_i1
246bp
FPKM:1.47 TPM:1.43
2786 A_SariASG_c15013_g1_i1
278bp
FPKM:1.85 TPM:1.79
2787 A_SariASG_c15014_g1_i1
359bp
60S_ribosomal_protein_L27_[Patagioenas_fasciata_monilis]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:1.80 TPM:1.75
2788 A_SariASG_c15016_g1_i1
215bp
FPKM:0.00 TPM:0.00
2789 A_SariASG_c15017_g1_i1
499bp
FPKM:3.23 TPM:3.13
2790 A_SariASG_c15019_g1_i1
228bp
FPKM:4.79 TPM:4.64
previous next from show/68433

- SilkBase 1999-2023 -