SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2071 A_SariASG_c13570_g1_i1
204bp
FPKM:0.83 TPM:0.81
2072 A_SariASG_c13576_g1_i1
240bp
ABC_transporter_G_family_member_23_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
FPKM:4.70 TPM:4.55
2073 A_SariASG_c1357_g1_i1
244bp
FPKM:1.00 TPM:0.97
2074 A_SariASG_c13580_g1_i1
308bp
PREDICTED:_uncharacterized_protein_LOC106136491_[Amyelois_transitella]
FPKM:1.50 TPM:1.45
2075 A_SariASG_c13581_g1_i1
409bp
FPKM:0.91 TPM:0.88
2076 A_SariASG_c13582_g1_i1
242bp
unnamed_protein_product,_partial_[Mus_musculus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005685 C U1 snRNP
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016477 P cell migration
GO:0016607 C nuclear speck
GO:0032465 P regulation of cytokinesis
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
GO:0071004 C U2-type prespliceosome
FPKM:2.05 TPM:1.98
2077 A_SariASG_c13583_g1_i1
248bp
reverse_transcriptase,_partial_[Papilio_xuthus]
FPKM:2.41 TPM:2.33
2078 A_SariASG_c13584_g1_i1
252bp
FPKM:1.85 TPM:1.79
2079 A_SariASG_c13585_g1_i1
371bp
FPKM:0.85 TPM:0.83
2080 A_SariASG_c13588_g1_i1
208bp
FPKM:2.35 TPM:2.27
2081 A_SariASG_c13597_g1_i1
201bp
FPKM:1.74 TPM:1.69
2082 A_SariASG_c13598_g1_i1
339bp
FPKM:0.00 TPM:0.00
2083 A_SariASG_c13599_g1_i1
281bp
FPKM:59.60 TPM:57.71
2084 A_SariASG_c1359_g1_i1
209bp
phosphatidylinositol_5-phosphate_4-kinase_type-2_beta_isoform_X3_[Helicoverpa_armigera]
FPKM:1.54 TPM:1.49
2085 A_SariASG_c13601_g1_i1
215bp
FPKM:2.12 TPM:2.05
2086 A_SariASG_c13604_g1_i1
207bp
FPKM:0.00 TPM:0.00
2087 A_SariASG_c13612_g1_i1
460bp
FPKM:2.43 TPM:2.35
2088 A_SariASG_c13616_g1_i1
217bp
FPKM:0.00 TPM:0.00
2089 A_SariASG_c13619_g1_i1
406bp
Ecdysteroid_UDP-glucosyltransferase_[Papilio_xuthus]
FPKM:1.10 TPM:1.07
2090 A_SariASG_c13626_g1_i1
293bp
hypothetical_protein_ACN38_g13205_[Penicillium_nordicum]
GO:0005739 C mitochondrion
FPKM:3.64 TPM:3.52
2091 A_SariASG_c13635_g1_i1
203bp
FPKM:0.84 TPM:0.82
2092 A_SariASG_c13636_g1_i1
350bp
FPKM:0.71 TPM:0.69
2093 A_SariASG_c13637_g1_i1
203bp
FPKM:2.53 TPM:2.45
2094 A_SariASG_c13639_g1_i1
327bp
FPKM:0.00 TPM:0.00
2095 A_SariASG_c13639_g1_i2
294bp
FPKM:0.00 TPM:0.00
2096 A_SariASG_c13641_g1_i1
306bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Diaphorina_citri]
FPKM:0.61 TPM:0.59
2097 A_SariASG_c13641_g2_i1
367bp
FPKM:0.43 TPM:0.42
2098 A_SariASG_c13644_g1_i1
354bp
FPKM:3.01 TPM:2.91
2099 A_SariASG_c13644_g1_i2
398bp
FPKM:0.00 TPM:0.00
2100 A_SariASG_c13645_g1_i1
253bp
FPKM:3.21 TPM:3.11
previous next from show/68433

- SilkBase 1999-2023 -