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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
181 A_SariASG_c10299_g1_i1
300bp
LOW_QUALITY_PROTEIN:_obscurin_[Bombyx_mori]
GO:0004672 F protein kinase activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0019902 F phosphatase binding
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0031034 P myosin filament assembly
GO:0031430 C M band
GO:0031672 C A band
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:0.95 TPM:0.92
182 A_SariASG_c102_g1_i1
294bp
laminin_receptor_precursor,_partial_[Ovis_aries]
GO:0000028 P ribosomal small subunit assembly
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005886 C plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0015935 C small ribosomal subunit
GO:0016020 C membrane
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0043236 F laminin binding
FPKM:1.64 TPM:1.59
183 A_SariASG_c10300_g1_i1
250bp
FPKM:37.75 TPM:36.56
184 A_SariASG_c10301_g1_i1
276bp
hypothetical_protein_[Piscirickettsia_salmonis]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.13 TPM:1.09
185 A_SariASG_c10302_g1_i1
313bp
FPKM:9.86 TPM:9.55
186 A_SariASG_c10303_g1_i1
601bp
FPKM:1.66 TPM:1.61
187 A_SariASG_c10306_g1_i1
292bp
FPKM:0.33 TPM:0.32
188 A_SariASG_c10307_g1_i1
273bp
PREDICTED:_jerky_protein_homolog-like_[Polistes_dominula]
FPKM:3.08 TPM:2.98
189 A_SariASG_c10309_g1_i1
203bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.53 TPM:2.45
190 A_SariASG_c1030_g1_i1
260bp
FPKM:2.58 TPM:2.50
191 A_SariASG_c10310_g1_i1
434bp
hypothetical_protein_RR48_05194_[Papilio_machaon]
FPKM:1.32 TPM:1.28
192 A_SariASG_c10311_g1_i1
456bp
FPKM:2.92 TPM:2.83
193 A_SariASG_c10314_g1_i1
457bp
FPKM:2.14 TPM:2.08
194 A_SariASG_c10315_g1_i1
250bp
FPKM:0.47 TPM:0.46
195 A_SariASG_c10318_g1_i1
214bp
FPKM:0.72 TPM:0.69
196 A_SariASG_c10319_g1_i1
471bp
PREDICTED:_uncharacterized_protein_LOC106709669_[Papilio_machaon]
FPKM:1.46 TPM:1.42
197 A_SariASG_c10321_g1_i1
262bp
FPKM:3.80 TPM:3.68
198 A_SariASG_c10322_g1_i1
266bp
FPKM:2.04 TPM:1.97
199 A_SariASG_c10325_g1_i1
202bp
FPKM:5.15 TPM:4.99
200 A_SariASG_c10327_g1_i1
222bp
FPKM:5.80 TPM:5.62
201 A_SariASG_c10328_g1_i1
283bp
FPKM:1.07 TPM:1.03
202 A_SariASG_c10330_g1_i1
645bp
putative_Cytosol_aminopeptidase_[Danaus_plexippus_plexippus]
FPKM:3.12 TPM:3.03
203 A_SariASG_c10331_g1_i1
204bp
FPKM:3.33 TPM:3.22
204 A_SariASG_c10332_g1_i1
209bp
FPKM:3.08 TPM:2.98
205 A_SariASG_c10339_g1_i1
278bp
FPKM:0.74 TPM:0.72
206 A_SariASG_c1033_g1_i1
354bp
RecName:_Full=Chorion_class_CB_protein_PC404
GO:0005213 F structural constituent of egg chorion
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0042600 C egg chorion
FPKM:0.69 TPM:0.67
207 A_SariASG_c10340_g1_i1
294bp
FPKM:1.31 TPM:1.27
208 A_SariASG_c10341_g1_i1
479bp
FPKM:1.29 TPM:1.24
209 A_SariASG_c10342_g1_i1
383bp
FPKM:3.23 TPM:3.13
210 A_SariASG_c10345_g1_i1
283bp
eukaryotic_translation_initiation_factor_2_subunit_1,_partial_[Odocoileus_virginianus_texanus]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005840 C ribosome
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0010494 C cytoplasmic stress granule
GO:0032057 P negative regulation of translational initiation in response to stress
GO:0033290 C eukaryotic 48S preinitiation complex
GO:0034198 P cellular response to amino acid starvation
GO:0034644 P cellular response to UV
GO:0034976 P response to endoplasmic reticulum stress
GO:0043022 F ribosome binding
GO:0043614 C multi-eIF complex
FPKM:1.07 TPM:1.03
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