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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

1471

A_SariASG_c1252_g1_i1

212bp

FPKM:1.48 TPM:1.43

1472

A_SariASG_c12530_g1_i1

420bp

FPKM:2.96 TPM:2.87

1473

A_SariASG_c12531_g1_i1

338bp

FPKM:5.52 TPM:5.35

1474

A_SariASG_c12532_g1_i1

455bp

SID1_transmembrane_family_member_1_[Papilio_machaon]

FPKM:4.31 TPM:4.18

1475

A_SariASG_c12532_g1_i2

367bp

SID1_transmembrane_family_member_1_[Papilio_machaon]

FPKM:0.00 TPM:0.00

1476

A_SariASG_c12534_g1_i1

969bp

FPKM:23.14 TPM:22.41

1477

A_SariASG_c12535_g1_i1

928bp

juvenile_hormone_esterase_binding_protein_[Manduca_sexta]

GO:0005739

mitochondrion

FPKM:24.72 TPM:23.94

1478

A_SariASG_c12536_g1_i1

305bp

PREDICTED:_protein_teashirt-like_isoform_X2_[Amyelois_transitella]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007275	P	multicellular organism development
GO:0007380	P	specification of segmental identity, head
GO:0010468	P	regulation of gene expression
GO:0046872	F	metal ion binding
GO:0048730	P	epidermis morphogenesis
GO:0048749	P	compound eye development
GO:0061330	P	Malpighian tubule stellate cell differentiation

FPKM:1.53 TPM:1.48

1479

A_SariASG_c12538_g1_i1

241bp

PREDICTED:_general_odorant-binding_protein_70-like,_partial_[Amyelois_transitella]

GO:0005549	F	odorant binding
GO:0005576	C	extracellular region
GO:0006810	P	transport
GO:0007608	P	sensory perception of smell
GO:0050896	P	response to stimulus

FPKM:3.10 TPM:3.00

1480

A_SariASG_c12539_g1_i1

5627bp

ATP-dependent_RNA_helicase_dbp2_isoform_X2_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0000166	F	nucleotide binding
GO:0000381	P	regulation of alternative mRNA splicing, via spliceosome
GO:0000398	P	mRNA splicing, via spliceosome
GO:0003676	F	nucleic acid binding
GO:0003712	F	transcription coregulator activity
GO:0003713	F	transcription coactivator activity
GO:0003723	F	RNA binding
GO:0003724	F	RNA helicase activity
GO:0004004	F	RNA helicase activity
GO:0004386	F	helicase activity
GO:0005515	F	protein binding
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005681	C	spliceosomal complex
GO:0005730	C	nucleolus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006397	P	mRNA processing
GO:0008380	P	RNA splicing
GO:0009299	P	mRNA transcription
GO:0010501	P	RNA secondary structure unwinding
GO:0016020	C	membrane
GO:0016049	P	cell growth
GO:0016787	F	hydrolase activity
GO:0016818	F	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019899	F	enzyme binding
GO:0030331	F	estrogen receptor binding
GO:0030529	C	ribonucleoprotein complex
GO:0033148	P	positive regulation of intracellular estrogen receptor signaling pathway
GO:0036002	F	pre-mRNA binding
GO:0043517	P	positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0044822	F	RNA binding
GO:0045069	P	regulation of viral genome replication
GO:0045667	P	regulation of osteoblast differentiation
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0048306	F	calcium-dependent protein binding
GO:0048511	P	rhythmic process
GO:0050681	F	androgen receptor binding
GO:0060765	P	regulation of androgen receptor signaling pathway
GO:0070062	C	extracellular exosome
GO:0071013	C	catalytic step 2 spliceosome
GO:0072332	P	intrinsic apoptotic signaling pathway by p53 class mediator
GO:2001014	P	regulation of skeletal muscle cell differentiation

FPKM:180.64 TPM:174.93

1481

A_SariASG_c1253_g1_i1

231bp

FPKM:8.09 TPM:7.83

1482

A_SariASG_c12540_g1_i1

228bp

FPKM:8.38 TPM:8.11

1483

A_SariASG_c12541_g1_i1

204bp

FPKM:0.83 TPM:0.81

1484

A_SariASG_c12542_g1_i1

785bp

PREDICTED:_signal_peptidase_complex_subunit_2_[Amyelois_transitella]

GO:0005783	C	endoplasmic reticulum
GO:0005787	C	signal peptidase complex
GO:0005789	C	endoplasmic reticulum membrane
GO:0006465	P	signal peptide processing
GO:0006508	P	proteolysis
GO:0008233	F	peptidase activity
GO:0012505	C	endomembrane system
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016787	F	hydrolase activity
GO:0031090	C	organelle membrane
GO:0043231	C	intracellular membrane-bounded organelle
GO:0045047	P	protein targeting to ER

FPKM:110.70 TPM:107.20

1485

A_SariASG_c12545_g1_i1

252bp

FPKM:5.55 TPM:5.38

1486

A_SariASG_c12547_g1_i1

250bp

FPKM:42.47 TPM:41.12

1487

A_SariASG_c12548_g1_i1

624bp

putative_Tryptophanyl-tRNA_synthetase_[Danaus_plexippus_plexippus]

GO:0000166	F	nucleotide binding
GO:0001525	P	angiogenesis
GO:0004812	F	aminoacyl-tRNA ligase activity
GO:0004830	F	tryptophan-tRNA ligase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006412	P	translation
GO:0006418	P	tRNA aminoacylation for protein translation
GO:0006436	P	tryptophanyl-tRNA aminoacylation
GO:0008285	P	negative regulation of cell population proliferation
GO:0016874	F	ligase activity
GO:0045765	P	regulation of angiogenesis
GO:0070062	C	extracellular exosome