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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1141 A_SariASG_c12038_g1_i1
209bp
FPKM:3.85 TPM:3.73
1142 A_SariASG_c12039_g1_i1
209bp
hypothetical_protein_[Acinetobacter_baumannii]
FPKM:1.54 TPM:1.49
1143 A_SariASG_c1203_g1_i1
241bp
FPKM:1.03 TPM:1.00
1144 A_SariASG_c12040_g1_i1
224bp
FPKM:1.89 TPM:1.83
1145 A_SariASG_c12044_g1_i1
393bp
FPKM:18.21 TPM:17.64
1146 A_SariASG_c12045_g1_i1
390bp
FPKM:5.49 TPM:5.32
1147 A_SariASG_c12046_g1_i1
461bp
FPKM:1.51 TPM:1.46
1148 A_SariASG_c12048_g1_i1
209bp
FPKM:6.16 TPM:5.97
1149 A_SariASG_c12049_g1_i1
449bp
FPKM:4.40 TPM:4.26
1150 A_SariASG_c1204_g1_i1
251bp
PREDICTED:_uncharacterized_protein_LOC106709840_[Papilio_machaon]
FPKM:1.87 TPM:1.81
1151 A_SariASG_c12050_g1_i1
218bp
FPKM:1.36 TPM:1.32
1152 A_SariASG_c12051_g1_i1
499bp
FPKM:1.35 TPM:1.30
1153 A_SariASG_c12052_g1_i1
347bp
FPKM:2.16 TPM:2.09
1154 A_SariASG_c12053_g1_i1
335bp
FPKM:11.74 TPM:11.37
1155 A_SariASG_c12056_g1_i1
235bp
FPKM:2.21 TPM:2.14
1156 A_SariASG_c12059_g1_i1
313bp
FPKM:0.58 TPM:0.56
1157 A_SariASG_c1205_g1_i1
359bp
FPKM:2.26 TPM:2.18
1158 A_SariASG_c12060_g1_i1
540bp
FPKM:4.93 TPM:4.78
1159 A_SariASG_c12061_g1_i1
266bp
FPKM:2.04 TPM:1.97
1160 A_SariASG_c12063_g1_i1
278bp
PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_A/B_isoform_X1_[Callithrix_jacchus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001837 P epithelial to mesenchymal transition
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030529 C ribonucleoprotein complex
GO:0043565 F sequence-specific DNA binding
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0090575 C RNA polymerase II transcription regulator complex
FPKM:3.70 TPM:3.58
1161 A_SariASG_c12064_g1_i1
204bp
FPKM:3.33 TPM:3.22
1162 A_SariASG_c12069_g1_i1
272bp
FPKM:0.00 TPM:0.00
1163 A_SariASG_c12071_g1_i1
406bp
FPKM:1.47 TPM:1.42
1164 A_SariASG_c12072_g1_i1
319bp
FPKM:1.68 TPM:1.62
1165 A_SariASG_c12073_g1_i1
236bp
FPKM:4.37 TPM:4.23
1166 A_SariASG_c12075_g1_i1
503bp
FPKM:0.80 TPM:0.77
1167 A_SariASG_c12076_g1_i1
628bp
m7GpppX_diphosphatase_[Helicoverpa_armigera]
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0036245 P cellular response to menadione
GO:0043069 P negative regulation of programmed cell death
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050072 F m7G(5')pppN diphosphatase activity
FPKM:2.16 TPM:2.09
1168 A_SariASG_c12078_g1_i1
413bp
PREDICTED:_S-formylglutathione_hydrolase_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0018738 F S-formylglutathione hydrolase activity
GO:0031410 C cytoplasmic vesicle
GO:0046294 P formaldehyde catabolic process
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
FPKM:0.72 TPM:0.69
1169 A_SariASG_c1207_g1_i1
319bp
FPKM:4.47 TPM:4.33
1170 A_SariASG_c12080_g1_i1
247bp
FPKM:3.40 TPM:3.29
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