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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
631 A_BomaMSG_c10712_g1_i1
495bp
FPKM:3.12 TPM:1.39
632 A_BomaMSG_c10713_g1_i1
451bp
balbiani_ring_protein_3_isoform_X2_[Bombyx_mori]
GO:0005102 F signaling receptor binding
GO:0005179 F hormone activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006590 P thyroid hormone generation
GO:0009268 P response to pH
GO:0032403 F protein-containing complex binding
GO:0032496 P response to lipopolysaccharide
GO:0042446 P hormone biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0043168 F anion binding
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0048471 C perinuclear region of cytoplasm
GO:0051087 F chaperone binding
GO:0052689 F carboxylic ester hydrolase activity
FPKM:2.68 TPM:1.20
633 A_BomaMSG_c10714_g1_i1
711bp
putative_uncharacterized_protein_DDB_G0282499_[Bombyx_mori]
FPKM:2.88 TPM:1.29
634 A_BomaMSG_c10715_g1_i1
649bp
congested-like_trachea_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:7.02 TPM:3.13
635 A_BomaMSG_c10716_g1_i1
552bp
FPKM:2.85 TPM:1.27
636 A_BomaMSG_c10717_g1_i1
593bp
DNA_repair_protein_RAD52_homolog_isoform_X4_[Bombyx_mori]
FPKM:2.74 TPM:1.22
637 A_BomaMSG_c10719_g1_i1
218bp
FPKM:0.00 TPM:0.00
638 A_BomaMSG_c10719_g1_i2
274bp
FPKM:0.00 TPM:0.00
639 A_BomaMSG_c10719_g1_i3
363bp
FPKM:0.63 TPM:0.28
640 A_BomaMSG_c1071_g1_i1
337bp
FPKM:1.60 TPM:0.72
641 A_BomaMSG_c1071_g1_i2
249bp
FPKM:1.03 TPM:0.46
642 A_BomaMSG_c10721_g1_i1
215bp
enhancer_of_mRNA-decapping_protein_4-like_[Bombyx_mori]
GO:0000932 C P-body
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:17.94 TPM:8.02
643 A_BomaMSG_c10722_g1_i1
260bp
FPKM:5.12 TPM:2.29
644 A_BomaMSG_c10722_g1_i2
383bp
FPKM:2.18 TPM:0.98
645 A_BomaMSG_c10723_g1_i1
372bp
FPKM:3.03 TPM:1.35
646 A_BomaMSG_c10724_g1_i1
549bp
golgin_subfamily_A_member_1_isoform_X2_[Bombyx_mori]
FPKM:12.15 TPM:5.43
647 A_BomaMSG_c10726_g1_i1
275bp
FPKM:2.68 TPM:1.20
648 A_BomaMSG_c10727_g1_i1
435bp
serine/threonine-protein_kinase_SMG1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006950 P response to stress
GO:0007274 P neuromuscular synaptic transmission
GO:0016246 P RNA interference
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0035195 P gene silencing by miRNA
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048489 P synaptic vesicle transport
GO:0050808 P synapse organization
FPKM:3.54 TPM:1.58
649 A_BomaMSG_c10728_g1_i1
451bp
putative_tRNA_threonylcarbamoyladenosine_biosynthesis_protein_CG14231_[Papilio_machaon]
GO:0000408 C EKC/KEOPS complex
GO:0002949 P tRNA threonylcarbamoyladenosine modification
GO:0003674 F molecular_function
GO:0004222 F metalloendopeptidase activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008033 P tRNA processing
GO:0008150 P biological_process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0046872 F metal ion binding
GO:0061711 F N(6)-L-threonylcarbamoyladenine synthase activity
FPKM:4.02 TPM:1.80
650 A_BomaMSG_c1072_g1_i1
278bp
FPKM:7.33 TPM:3.27
651 A_BomaMSG_c10730_g1_i1
361bp
FPKM:1.59 TPM:0.71
652 A_BomaMSG_c10731_g1_i1
459bp
FPKM:2.18 TPM:0.97
653 A_BomaMSG_c10734_g1_i1
426bp
mitochondrial_intermediate_peptidase_isoform_X1_[Bombyx_mori]
FPKM:1.22 TPM:0.54
654 A_BomaMSG_c10735_g1_i1
368bp
FPKM:4.63 TPM:2.07
655 A_BomaMSG_c10736_g1_i1
472bp
FPKM:3.34 TPM:1.49
656 A_BomaMSG_c10737_g1_i1
689bp
FPKM:1.62 TPM:0.73
657 A_BomaMSG_c10738_g1_i1
264bp
FPKM:6.45 TPM:2.88
658 A_BomaMSG_c1073_g1_i1
1449bp
glutaredoxin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005773 C vacuole
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:43.07 TPM:19.25
659 A_BomaMSG_c10740_g1_i1
201bp
FPKM:17.21 TPM:7.69
660 A_BomaMSG_c10741_g1_i1
414bp
FPKM:2.04 TPM:0.91
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