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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
61 A_BomaMSG_c10086_g1_i1
271bp
FPKM:0.00 TPM:0.00
62 A_BomaMSG_c10087_g1_i1
210bp
FPKM:2.14 TPM:0.96
63 A_BomaMSG_c10088_g1_i1
883bp
structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016605 C PML body
GO:0030915 C Smc5-Smc6 complex
GO:0051276 P chromosome organization
GO:0090398 P cellular senescence
FPKM:2.30 TPM:1.03
64 A_BomaMSG_c10089_g1_i1
238bp
FPKM:4.52 TPM:2.02
65 A_BomaMSG_c1008_g1_i1
238bp
PREDICTED:_SNF-related_serine/threonine-protein_kinase-like,_partial_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:3.01 TPM:1.35
66 A_BomaMSG_c10093_g1_i1
442bp
bromodomain-containing_protein_7_[Bombyx_mori]
GO:0002039 F p53 binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0016055 P Wnt signaling pathway
GO:0035066 P positive regulation of histone acetylation
GO:0042393 F histone binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070577 F lysine-acetylated histone binding
GO:0090544 C SWI/SNF superfamily-type complex
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
FPKM:4.61 TPM:2.06
67 A_BomaMSG_c10094_g1_i1
269bp
beta-ureidopropionase-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003837 F beta-ureidopropionase activity
GO:0005737 C cytoplasm
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019483 P beta-alanine biosynthetic process
GO:0046872 F metal ion binding
FPKM:6.75 TPM:3.01
68 A_BomaMSG_c10097_g1_i1
262bp
FPKM:5.96 TPM:2.67
69 A_BomaMSG_c10099_g1_i1
206bp
FPKM:4.55 TPM:2.03
70 A_BomaMSG_c10102_g1_i1
251bp
FPKM:5.28 TPM:2.36
71 A_BomaMSG_c10104_g1_i1
240bp
nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
FPKM:0.00 TPM:0.00
72 A_BomaMSG_c10104_g1_i2
329bp
nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
FPKM:4.50 TPM:2.01
73 A_BomaMSG_c10106_g1_i1
222bp
FPKM:1.82 TPM:0.81
74 A_BomaMSG_c10108_g1_i1
202bp
FPKM:9.68 TPM:4.33
75 A_BomaMSG_c1010_g1_i1
265bp
aladin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007612 P learning
GO:0009566 P fertilization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0051028 P mRNA transport
FPKM:3.49 TPM:1.56
76 A_BomaMSG_c10110_g1_i1
403bp
FPKM:3.72 TPM:1.66
77 A_BomaMSG_c10113_g1_i1
228bp
PREDICTED:_protein_bric-a-brac_2-like_isoform_X3_[Amyelois_transitella]
FPKM:16.87 TPM:7.54
78 A_BomaMSG_c10115_g1_i1
388bp
FPKM:3.96 TPM:1.77
79 A_BomaMSG_c10116_g1_i1
274bp
FPKM:5.94 TPM:2.65
80 A_BomaMSG_c1011_g1_i1
326bp
FPKM:1.41 TPM:0.63
81 A_BomaMSG_c1011_g1_i2
333bp
FPKM:2.68 TPM:1.20
82 A_BomaMSG_c10122_g1_i1
236bp
FPKM:3.85 TPM:1.72
83 A_BomaMSG_c10123_g1_i1
370bp
FPKM:0.31 TPM:0.14
84 A_BomaMSG_c10125_g1_i1
354bp
FPKM:3.62 TPM:1.62
85 A_BomaMSG_c10126_g1_i1
251bp
FPKM:5.28 TPM:2.36
86 A_BomaMSG_c1012_g1_i1
386bp
KAT8_regulatory_NSL_complex_subunit_1-like_protein_isoform_X2_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0016568 P chromatin organization
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0071339 C MLL1 complex
FPKM:1.99 TPM:0.89
87 A_BomaMSG_c10134_g1_i1
208bp
FPKM:4.41 TPM:1.97
88 A_BomaMSG_c10139_g1_i1
201bp
membrane-associated_guanylate_kinase,_WW_and_PDZ_domain-containing_protein_1-like,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032947 F molecular adaptor activity
GO:0042995 C cell projection
GO:0051393 F alpha-actinin binding
GO:0070997 P neuron death
FPKM:3.69 TPM:1.65
89 A_BomaMSG_c1013_g1_i1
340bp
PREDICTED:_uncharacterized_protein_LOC106105849_[Papilio_polytes]
FPKM:1.77 TPM:0.79
90 A_BomaMSG_c10140_g1_i1
357bp
FPKM:1.95 TPM:0.87
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