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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
5431 BGIBMGA005431-TA
669bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56B1F (44%/118)
Cluster: PREDICTED: similar to CG33508-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG33508-PA - Tribolium castaneum
GO:0005216 F ion channel activity
GO:0005272 F sodium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0031402 F sodium ion binding
5432 BGIBMGA005432-TA
1896bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VIG5 (30%/430)
Cluster: CG9264-PA, isoform A; n=4; Sophophora|Rep: CG9264-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0006810 P transport
5433 BGIBMGA005433-TA
1548bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_O00400 (51%/479)
Cluster: Acetyl-coenzyme A transporter 1; n=26; Coelomata|Rep: Acetyl-coenzyme A transporter 1 - Homo sapiens (Human)
GO:0005624 C membrane fraction
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral to plasma membrane
GO:0006810 P transport
GO:0008521 F acetyl-CoA transporter activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0008415 F acyltransferase activity
GO:0016740 F transferase activity
5434 BGIBMGA005434-TA
552bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5TLD2 (91%/163)
Cluster: Replication protein A middle subunit; n=1; Bombyx mori|Rep: Replication protein A middle subunit - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
5435 BGIBMGA005435-TA
1299bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B5A6F (31%/420)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0005813 C centrosome
GO:0007049 P cell cycle
GO:0051298 P centrosome duplication
5436 BGIBMGA005436-TA
273bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B4E2D (44%/75)
Cluster: PREDICTED: similar to spinster type IV; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to spinster type IV - Nasonia vitripennis
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008582 P regulation of synaptic growth at neuromuscular junction
GO:0012501 P programmed cell death
GO:0015520 F tetracycline:hydrogen antiporter activity
GO:0015904 P tetracycline transport
GO:0016021 C integral to membrane
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045477 P regulation of nurse cell apoptosis
GO:0045924 P regulation of female receptivity
GO:0046677 P response to antibiotic
GO:0048488 P synaptic vesicle endocytosis
5437 BGIBMGA005437-TA
1743bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D564B8 (56%/321)
Cluster: PREDICTED: similar to CG8428-PC, isoform C; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG8428-PC, isoform C - Tribolium castaneum
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008582 P regulation of synaptic growth at neuromuscular junction
GO:0012501 P programmed cell death
GO:0015520 F tetracycline:hydrogen antiporter activity
GO:0015904 P tetracycline transport
GO:0016021 C integral to membrane
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045477 P regulation of nurse cell apoptosis
GO:0045924 P regulation of female receptivity
GO:0046677 P response to antibiotic
GO:0048488 P synaptic vesicle endocytosis
5438 BGIBMGA005438-TA
663bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q2F657 (80%/139)
Cluster: Ribonucleic acid binding protein S1; n=3; Coelomata|Rep: Ribonucleic acid binding protein S1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0000184 P mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5439 BGIBMGA005439-TA
675bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_O75251 (76%/156)
Cluster: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor; n=9; Catarrhini|Rep: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor - Homo sapiens (Human)
GO:0003954 F NADH dehydrogenase activity
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006118 P electron transport
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NADH or NADPH
GO:0016655 F oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0005615 C extracellular space
GO:0005743 C mitochondrial inner membrane
GO:0048038 F quinone binding
GO:0050136 F NADH dehydrogenase (quinone) activity
5440 BGIBMGA005440-TA
666bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VX26 (38%/177)
Cluster: CG32556-PA, isoform A; n=4; Drosophila melanogaster|Rep: CG32556-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
5441 BGIBMGA005441-TA
2457bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56B92 (37%/513)
Cluster: PREDICTED: similar to CG32556-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG32556-PA, isoform A - Tribolium castaneum
GO:0005515 F protein binding
5442 BGIBMGA005442-TA
1263bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56FB5 (40%/393)
Cluster: PREDICTED: similar to CG18578-PA; n=7; Tribolium castaneum|Rep: PREDICTED: similar to CG18578-PA - Tribolium castaneum
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F transferase activity, transferring glycosyl groups
GO:0016758 F transferase activity, transferring hexosyl groups
5443 BGIBMGA005443-TA
1461bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56F1E (36%/478)
Cluster: PREDICTED: similar to CG18578-PA; n=2; Tribolium castaneum|Rep: PREDICTED: similar to CG18578-PA - Tribolium castaneum
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F transferase activity, transferring glycosyl groups
GO:0016758 F transferase activity, transferring hexosyl groups
5444 BGIBMGA005444-TA
1233bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q92947 (65%/352)
Cluster: Glutaryl-CoA dehydrogenase, mitochondrial precursor; n=271; cellular organisms|Rep: Glutaryl-CoA dehydrogenase, mitochondrial precursor - Homo sapiens (Human)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0004361 F glutaryl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006118 P electron transport
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
5445 BGIBMGA005445-TA
3453bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D8DC18 (25%/927)
Cluster: UPI0000D8DC18 related cluster; n=6; Danio rerio|Rep: UPI0000D8DC18 UniRef100 entry - Danio rerio
GO:0004386 F helicase activity
GO:0004519 F endonuclease activity
5446 BGIBMGA005446-TA
360bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56B73 (46%/115)
Cluster: PREDICTED: similar to CG15643-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG15643-PA - Tribolium castaneum
5447 BGIBMGA005447-TA
1761bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q17DD8 (42%/538)
Cluster: Gamma glutamyl transpeptidases; n=10; Culicidae|Rep: Gamma glutamyl transpeptidases - Aedes aegypti (Yellowfever mosquito)
GO:0003840 F gamma-glutamyltransferase activity
GO:0005515 F protein binding
5448 BGIBMGA005448-TA
1758bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5TLD3 (97%/585)
Cluster: Replication protein A large subunit; n=1; Bombyx mori|Rep: Replication protein A large subunit - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0003697 F single-stranded DNA binding
GO:0005662 C DNA replication factor A complex
GO:0006261 P DNA-dependent DNA replication
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0005515 F protein binding
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0016605 C PML body
5449 BGIBMGA005449-TA
3600bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q92878 (27%/1019)
Cluster: DNA repair protein RAD50; n=37; Euteleostomi|Rep: DNA repair protein RAD50 - Homo sapiens (Human)
GO:0000014 F single-stranded DNA specific endodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0000019 P regulation of mitotic recombination
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006974 P response to DNA damage stimulus
GO:0007004 P telomere maintenance via telomerase
GO:0007049 P cell cycle
GO:0007126 P meiosis
GO:0007131 P meiotic recombination
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0030674 F protein binding, bridging
GO:0030870 C Mre11 complex
GO:0046872 F metal ion binding
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000793 C condensed chromosome
GO:0003690 F double-stranded DNA binding
GO:0007001 P chromosome organization and biogenesis (sensu Eukaryota)
GO:0008104 P protein localization
GO:0016233 P telomere capping
5450 BGIBMGA005450-TA
1848bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B4F31 (78%/147)
Cluster: PREDICTED: similar to zinc finger protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to zinc finger protein - Nasonia vitripennis
5451 BGIBMGA005451-TA
339bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VVX6 (55%/86)
Cluster: CG14084-PA, isoform A; n=7; Endopterygota|Rep: CG14084-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P ER to Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016192 P vesicle-mediated transport
5452 BGIBMGA005452-TA
1263bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B49F9 (58%/419)
Cluster: PREDICTED: similar to wd-repeat protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to wd-repeat protein - Nasonia vitripennis
GO:0005515 F protein binding
GO:0005634 C nucleus
5453 BGIBMGA005453-TA
960bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q7Q689 (60%/307)
Cluster: ENSANGP00000010777; n=2; Culicidae|Rep: ENSANGP00000010777 - Anopheles gambiae str. PEST
GO:0005515 F protein binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
5454 BGIBMGA005454-TA
2043bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B4C41 (49%/688)
Cluster: PREDICTED: similar to Nhl (ring finger b-box coiled coil) domain containing protein 3; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Nhl (ring finger b-box coiled coil) domain containing protein 3 - Nasonia vitripennis
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0005737 C cytoplasm
GO:0007399 P nervous system development
GO:0008022 F protein C-terminus binding
5455 BGIBMGA005455-TA
435bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9D1L0 (42%/97)
Cluster: Coiled-coil-helix-coiled-coil-helix domain-containing protein 2; n=28; Coelomata|Rep: Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 - Mus musculus (Mouse)
GO:0005739 C mitochondrion
5456 BGIBMGA005456-TA
312bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9D1L0 (41%/73)
Cluster: Coiled-coil-helix-coiled-coil-helix domain-containing protein 2; n=28; Coelomata|Rep: Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 - Mus musculus (Mouse)
GO:0005739 C mitochondrion
5457 BGIBMGA005457-TA
168bp
 Bomo_Scaf047
chromo8/Bm_scaf19
6098939bp
(no hit)
5458 BGIBMGA005458-TA
918bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI000051A961 (45%/171)
Cluster: PREDICTED: similar to Serine pyruvate aminotransferase CG3926-PA; n=2; Apocrita|Rep: PREDICTED: similar to Serine pyruvate aminotransferase CG3926-PA - Apis mellifera
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0008483 F transaminase activity
GO:0030170 F pyridoxal phosphate binding
5459 BGIBMGA005459-TA
1161bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B5142 (43%/380)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
5460 BGIBMGA005460-TA
897bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9UET6 (65%/290)
Cluster: Putative ribosomal RNA methyltransferase 1 (EC 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase); n=23; Eukaryota|Rep: Putative ribosomal RNA methyltransferase 1 (EC 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) - Homo sapiens (Human)
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0051301 P cell division
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005338 F nucleotide-sugar transmembrane transporter activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0015780 P nucleotide-sugar transport
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