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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
5371 BGIBMGA005371-TA
453bp
 Bomo_Scaf663
chromo8/Bm_scaf19
6098939bp
UniRef50_P72964 (33%/48)
Cluster: Ycf45 protein; n=10; Cyanobacteria|Rep: Ycf45 protein - Synechocystis sp. (strain PCC 6803)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0005524 F ATP binding
GO:0017111 F nucleoside-triphosphatase activity
GO:0005506 F iron ion binding
GO:0006118 P electron transport
GO:0009055 F electron carrier activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0003677 F DNA binding
GO:0004003 F ATP-dependent DNA helicase activity
GO:0004386 F helicase activity
GO:0006281 P DNA repair
GO:0016787 F hydrolase activity
GO:0005488 F binding
5372 BGIBMGA005372-TA
555bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q28YJ5 (45%/187)
Cluster: GA15885-PA; n=5; Endopterygota|Rep: GA15885-PA - Drosophila pseudoobscura (Fruit fly)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007498 P mesoderm development
5373 BGIBMGA005373-TA
4119bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q6NNV9 (52%/630)
Cluster: RH24371p; n=9; Endopterygota|Rep: RH24371p - Drosophila melanogaster (Fruit fly)
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0006520 P amino acid metabolic process
GO:0015174 F basic amino acid transmembrane transporter activity
5374 BGIBMGA005374-TA
1344bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B4C59 (44%/469)
Cluster: PREDICTED: similar to polynucleotide kinase- 3-phosphatase; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to polynucleotide kinase- 3-phosphatase - Nasonia vitripennis
5375 BGIBMGA005375-TA
993bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000DB6C52 (27%/152)
Cluster: PREDICTED: hypothetical protein; n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein - Apis mellifera
GO:0005216 F ion channel activity
GO:0005272 F sodium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0031402 F sodium ion binding
5376 BGIBMGA005376-TA
1530bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56B1F (48%/451)
Cluster: PREDICTED: similar to CG33508-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG33508-PA - Tribolium castaneum
GO:0005216 F ion channel activity
GO:0005272 F sodium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0031402 F sodium ion binding
5377 BGIBMGA005377-TA
1059bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VNP8 (42%/222)
Cluster: CG11115-PA; n=8; Endopterygota|Rep: CG11115-PA - Drosophila melanogaster (Fruit fly)
GO:0003702 F RNA polymerase II transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0008270 F zinc ion binding
GO:0045449 P regulation of transcription
GO:0003676 F nucleic acid binding
GO:0003700 F transcription factor activity
GO:0005675 C holo TFIIH complex
GO:0006350 P transcription
GO:0006352 P transcription initiation
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006974 P response to DNA damage stimulus
GO:0008135 F translation factor activity, nucleic acid binding
GO:0009411 P response to UV
GO:0046872 F metal ion binding
GO:0006289 P nucleotide-excision repair
GO:0006358 P regulation of global transcription from RNA polymerase II promoter
GO:0016251 F general RNA polymerase II transcription factor activity
5378 BGIBMGA005378-TA
738bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q7RDV9 (28%/87)
Cluster: Putative uncharacterized protein PY05311; n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein PY05311 - Plasmodium yoelii yoelii
GO:0008270 F zinc ion binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008168 F methyltransferase activity
GO:0032259 P methylation
5379 BGIBMGA005379-TA
192bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI000038280C (33%/53)
Cluster: COG3696: Putative silver efflux pump; n=1; Magnetospirillum magnetotacticum MS-1|Rep: COG3696: Putative silver efflux pump - Magnetospirillum magnetotacticum MS-1
GO:0005215 F transporter activity
GO:0006810 P transport
5380 BGIBMGA005380-TA
330bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MPC8 (72%/106)
Cluster: Hemolymph proteinase 6; n=1; Manduca sexta|Rep: Hemolymph proteinase 6 - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0003824 F catalytic activity
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
5381 BGIBMGA005381-TA
999bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q13601 (59%/328)
Cluster: KRR1 small subunit processome component homolog; n=44; Eukaryota|Rep: KRR1 small subunit processome component homolog - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005732 C small nucleolar ribonucleoprotein complex
GO:0030515 F snoRNA binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small subunit processome
GO:0042254 P ribosome biogenesis and assembly
GO:0002119 P larval development (sensu Nematoda)
GO:0018991 P oviposition
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of body size
5382 BGIBMGA005382-TA
3945bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5W7N6 (95%/1306)
Cluster: Cytosine-specific methyltransferase; n=1; Bombyx mori|Rep: Cytosine-specific methyltransferase - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0000122 P negative regulation of transcription from RNA polymerase II promoter
GO:0000792 C heterochromatin
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008134 F transcription factor binding
GO:0016458 P gene silencing
GO:0016564 F transcription repressor activity
GO:0045892 P negative regulation of transcription, DNA-dependent
GO:0046872 F metal ion binding
5383 BGIBMGA005383-TA
153bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5W7N6 (100%/43)
Cluster: Cytosine-specific methyltransferase; n=1; Bombyx mori|Rep: Cytosine-specific methyltransferase - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0005634 C nucleus
GO:0008134 F transcription factor binding
GO:0000122 P negative regulation of transcription from RNA polymerase II promoter
GO:0000792 C heterochromatin
GO:0005515 F protein binding
GO:0005657 C replication fork
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0016458 P gene silencing
GO:0016564 F transcription repressor activity
GO:0045892 P negative regulation of transcription, DNA-dependent
GO:0046872 F metal ion binding
5384 BGIBMGA005384-TA
249bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q6NLJ9 (58%/82)
Cluster: AT19138p; n=8; Coelomata|Rep: AT19138p - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006915 P apoptosis
GO:0006916 P anti-apoptosis
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0043027 F caspase inhibitor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005758 C mitochondrial intermembrane space
GO:0007005 P mitochondrion organization and biogenesis
5385 BGIBMGA005385-TA
375bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q73PY9 (36%/58)
Cluster: Sensor protein; n=1; Treponema denticola|Rep: Sensor protein - Treponema denticola
GO:0000155 F two-component sensor activity
GO:0004673 F protein histidine kinase activity
GO:0005524 F ATP binding
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
GO:0009294 P DNA mediated transformation
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
5386 BGIBMGA005386-TA
53937bp
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D57150 (54%/173)
Cluster: PREDICTED: similar to CG6742-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG6742-PA, isoform A - Tribolium castaneum
GO:0043087 P regulation of GTPase activity
GO:0005096 F GTPase activator activity
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5387 BGIBMGA005387-TA
405bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D57150 (53%/119)
Cluster: PREDICTED: similar to CG6742-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG6742-PA, isoform A - Tribolium castaneum
GO:0005096 F GTPase activator activity
GO:0008270 F zinc ion binding
GO:0043087 P regulation of GTPase activity
GO:0046872 F metal ion binding
5388 BGIBMGA005388-TA
438bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q8IQJ7 (55%/144)
Cluster: CG10171-PB, isoform B; n=9; Endopterygota|Rep: CG10171-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0016020 C membrane
GO:0016021 C integral to membrane
5389 BGIBMGA005389-TA
1548bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B4D7E (56%/467)
Cluster: PREDICTED: similar to CG4330-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG4330-PA - Nasonia vitripennis
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0006810 P transport
GO:0016021 C integral to membrane
5390 BGIBMGA005390-TA
654bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q8T306 (50%/228)
Cluster: Helix-loop-helix transcription factor; n=2; Tribolium castaneum|Rep: Helix-loop-helix transcription factor - Tribolium castaneum (Red flour beetle)
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0030528 F transcription regulator activity
GO:0045449 P regulation of transcription
GO:0000122 P negative regulation of transcription from RNA polymerase II promoter
GO:0000902 P cell morphogenesis
GO:0005515 F protein binding
GO:0006350 P transcription
GO:0007275 P multicellular organismal development
GO:0007366 P periodic partitioning by pair rule gene
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007460 P R8 cell fate commitment
GO:0016044 P membrane organization and biogenesis
GO:0016481 P negative regulation of transcription
GO:0016565 F general transcriptional repressor activity
GO:0035239 P tube morphogenesis
GO:0035289 P posterior head segmentation
GO:0035290 P trunk segmentation
GO:0045892 P negative regulation of transcription, DNA-dependent
5391 BGIBMGA005391-TA
774bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q1PCB0 (100%/257)
Cluster: Pyridoxine 5'-phosphate oxidase; n=5; Endopterygota|Rep: Pyridoxine 5'-phosphate oxidase - Bombyx mori (Silk moth)
GO:0004733 F pyridoxamine-phosphate oxidase activity
GO:0008615 P pyridoxine biosynthetic process
GO:0010181 F FMN binding
GO:0005515 F protein binding
GO:0016491 F oxidoreductase activity
5392 BGIBMGA005392-TA
654bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9V3P3 (55%/127)
Cluster: CG1591-PA; n=11; Coelomata|Rep: CG1591-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005829 C cytosol
GO:0008537 C proteasome activator complex
GO:0008538 F proteasome activator activity
GO:0043234 C protein complex
GO:0000502 C proteasome complex (sensu Eukaryota)
GO:0005737 C cytoplasm
GO:0006955 P immune response
GO:0019884 P antigen processing and presentation of exogenous antigen
5393 BGIBMGA005393-TA
207bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q29KN6 (51%/39)
Cluster: GA14863-PA; n=1; Drosophila pseudoobscura|Rep: GA14863-PA - Drosophila pseudoobscura (Fruit fly)
5394 BGIBMGA005394-TA
642bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q92954 (31%/136)
Cluster: Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part]; n=13; Eutheria|Rep: Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0005615 C extracellular space
GO:0008283 P cell proliferation
GO:0046872 F metal ion binding
5395 BGIBMGA005395-TA
1071bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B5C32 (60%/373)
Cluster: PREDICTED: similar to RE14437p; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to RE14437p - Nasonia vitripennis
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005622 C intracellular
GO:0005737 C cytoplasm
GO:0031054 P pre-microRNA processing
5396 BGIBMGA005396-TA
1395bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q8IXS2 (25%/391)
Cluster: Coiled-coil domain-containing protein 65; n=21; Deuterostomia|Rep: Coiled-coil domain-containing protein 65 - Homo sapiens (Human)
5397 BGIBMGA005397-TA
324bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5TUX2 (57%/80)
Cluster: ENSANGP00000025612; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000025612 - Anopheles gambiae str. PEST
GO:0042302 F structural constituent of cuticle
5398 BGIBMGA005398-TA
306bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000DB6ECB (46%/82)
Cluster: PREDICTED: similar to CG9784-PA isoform 1; n=2; Apocrita|Rep: PREDICTED: similar to CG9784-PA isoform 1 - Apis mellifera
GO:0004437 F inositol or phosphatidylinositol phosphatase activity
5399 BGIBMGA005399-TA
540bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_A7RS67 (30%/76)
Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
5400 BGIBMGA005400-TA
186bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_A7BV82 (35%/40)
Cluster: Signal transduction histidine kinase; n=2; Beggiatoa|Rep: Signal transduction histidine kinase - Beggiatoa sp. PS
GO:0000155 F two-component sensor activity
GO:0000156 F two-component response regulator activity
GO:0000160 P two-component signal transduction system (phosphorelay)
GO:0004673 F protein histidine kinase activity
GO:0004871 F signal transducer activity
GO:0005524 F ATP binding
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
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