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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
5281 BGIBMGA005281-TA
1614bp
 Bomo_Chr8
chromo8/Bm_scaf58
2336930bp
UniRef50_Q7PV79 (89%/204)
Cluster: ENSANGP00000016663; n=2; Culicidae|Rep: ENSANGP00000016663 - Anopheles gambiae str. PEST
GO:0005515 F protein binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
5282 BGIBMGA005282-TA
846bp
 Bomo_Chr8
chromo8/Bm_scaf58
2336930bp
UniRef50_Q15427 (87%/160)
Cluster: Splicing factor 3B subunit 4; n=37; Eukaryota|Rep: Splicing factor 3B subunit 4 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0000398 P nuclear mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosome
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0031202 F RNA splicing factor activity, transesterification mechanism
5283 BGIBMGA005283-TA
381bp
 Bomo_Chr8
chromo8/Bm_scaf58
2336930bp
UniRef50_Q2LYZ6 (46%/26)
Cluster: GA20253-PA; n=1; Drosophila pseudoobscura|Rep: GA20253-PA - Drosophila pseudoobscura (Fruit fly)
5284 BGIBMGA005284-TA
339bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VKL0 (46%/97)
Cluster: CG31868-PA; n=3; Diptera|Rep: CG31868-PA - Drosophila melanogaster (Fruit fly)
GO:0005634 C nucleus
5285 BGIBMGA005285-TA
975bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q8IR85 (48%/328)
Cluster: CG1847-PB, isoform B; n=7; Endopterygota|Rep: CG1847-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0005488 F binding
GO:0006457 P protein folding
5286 BGIBMGA005286-TA
1692bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q17NM7 (50%/567)
Cluster: RNA m5u methyltransferase; n=2; Culicidae|Rep: RNA m5u methyltransferase - Aedes aegypti (Yellowfever mosquito)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0008152 P metabolic process
5287 BGIBMGA005287-TA
1056bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q86B61 (48%/241)
Cluster: Tyramine-beta-hydroxylase; n=2; Diptera|Rep: Tyramine-beta-hydroxylase - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004500 F dopamine beta-monooxygenase activity
GO:0005507 F copper ion binding
GO:0006548 P histidine catabolic process
GO:0006584 P catecholamine metabolic process
GO:0006589 P octopamine biosynthetic process
GO:0007268 P synaptic transmission
GO:0007613 P memory
GO:0009987 P cellular process
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016491 F oxidoreductase activity
GO:0030728 P ovulation
GO:0042136 P neurotransmitter biosynthetic process
GO:0046872 F metal ion binding
GO:0048149 P behavioral response to ethanol
GO:0005737 C cytoplasm
GO:0030054 C cell junction
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
5288 BGIBMGA005288-TA
2103bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B6175 (68%/580)
Cluster: PREDICTED: similar to structure-specific recognition protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to structure-specific recognition protein - Nasonia vitripennis
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006974 P response to DNA damage stimulus
5289 BGIBMGA005289-TA
360bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q06943 (54%/71)
Cluster: High mobility group protein Z; n=4; Diptera|Rep: High mobility group protein Z - Drosophila melanogaster (Fruit fly)
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-dependent
GO:0000785 C chromatin
GO:0005515 F protein binding
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006350 P transcription
GO:0006974 P response to DNA damage stimulus
5290 BGIBMGA005290-TA
837bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9W328 (51%/282)
Cluster: CG3004-PA; n=4; Coelomata|Rep: CG3004-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0000226 P microtubule cytoskeleton organization and biogenesis
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007059 P chromosome segregation
5291 BGIBMGA005291-TA
267bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q7JX57 (47%/85)
Cluster: UPF0466 protein CG17680, mitochondrial precursor; n=2; Sophophora|Rep: UPF0466 protein CG17680, mitochondrial precursor - Drosophila melanogaster (Fruit fly)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral to membrane
5292 BGIBMGA005292-TA
1419bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q17PP4 (56%/315)
Cluster: Inositol triphosphate 3-kinase c; n=1; Aedes aegypti|Rep: Inositol triphosphate 3-kinase c - Aedes aegypti (Yellowfever mosquito)
GO:0008440 F inositol trisphosphate 3-kinase activity
GO:0016301 F kinase activity
5293 BGIBMGA005293-TA
1833bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_A2FQ07 (25%/276)
Cluster: Viral A-type inclusion protein, putative; n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion protein, putative - Trichomonas vaginalis G3
5294 BGIBMGA005294-TA
477bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
(no hit)
5295 BGIBMGA005295-TA
156bp
 Bomo_Scaf001
chromo8/Bm_scaf19
6098939bp
UniRef50_Q24310 (43%/39)
Cluster: Polyprotein; n=1; Drosophila melanogaster|Rep: Polyprotein - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0006278 P RNA-dependent DNA replication
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
5296 BGIBMGA005296-TA
153bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
(no hit)
5297 BGIBMGA005297-TA
1293bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56DBF (36%/306)
Cluster: PREDICTED: similar to trace amine associated receptor 3; n=1; Tribolium castaneum|Rep: PREDICTED: similar to trace amine associated receptor 3 - Tribolium castaneum
GO:0004871 F signal transducer activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007165 P signal transduction
GO:0007623 P circadian rhythm
GO:0048511 P rhythmic process
5298 BGIBMGA005298-TA
351bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VYR2 (41%/68)
Cluster: CG1492-PA; n=2; Sophophora|Rep: CG1492-PA - Drosophila melanogaster (Fruit fly)
GO:0003840 F gamma-glutamyltransferase activity
5299 BGIBMGA005299-TA
207bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VKC5 (79%/62)
Cluster: CG6770-PA; n=9; Arthropoda|Rep: CG6770-PA - Drosophila melanogaster (Fruit fly)
GO:0003677 F DNA binding
5300 BGIBMGA005300-TA
1515bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q7Q4V8 (52%/503)
Cluster: ENSANGP00000010230; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000010230 - Anopheles gambiae str. PEST
GO:0003840 F gamma-glutamyltransferase activity
5301 BGIBMGA005301-TA
771bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_A0FDQ8 (73%/219)
Cluster: Putative uncharacterized protein; n=1; Bombyx mori|Rep: Putative uncharacterized protein - Bombyx mori (Silk moth)
5302 BGIBMGA005302-TA
507bp
 Bomo_Scaf001
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (56%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
5303 BGIBMGA005303-TA
225bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (56%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
5304 BGIBMGA005304-TA
2082bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_A7SA93 (40%/64)
Cluster: Predicted protein; n=2; Eumetazoa|Rep: Predicted protein - Nematostella vectensis
5305 BGIBMGA005305-TA
4467bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_Q1HRV5 (33%/249)
Cluster: Zinc finger protein; n=2; Aedes aegypti|Rep: Zinc finger protein - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
5306 BGIBMGA005306-TA
2391bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56DD3 (46%/258)
Cluster: PREDICTED: similar to sarcolemma associated protein; n=1; Tribolium castaneum|Rep: PREDICTED: similar to sarcolemma associated protein - Tribolium castaneum
GO:0005790 C smooth endoplasmic reticulum
GO:0005887 C integral to plasma membrane
GO:0006457 P protein folding
GO:0006936 P muscle contraction
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016272 C prefoldin complex
GO:0051082 F unfolded protein binding
5307 BGIBMGA005307-TA
414bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI00015B50E1 (34%/113)
Cluster: PREDICTED: similar to 80 kda MCM3-associated protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to 80 kda MCM3-associated protein - Nasonia vitripennis
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0007275 P multicellular organismal development
GO:0007283 P spermatogenesis
GO:0007292 P female gamete generation
GO:0009790 P embryonic development
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
GO:0000166 F nucleotide binding
GO:0008270 F zinc ion binding
5308 BGIBMGA005308-TA
4665bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D55F9E (48%/408)
Cluster: PREDICTED: similar to CG32562-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG32562-PA - Tribolium castaneum
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0007275 P multicellular organismal development
GO:0007283 P spermatogenesis
GO:0007292 P female gamete generation
GO:0009790 P embryonic development
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
5309 BGIBMGA005309-TA
369bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_A2G757 (30%/53)
Cluster: Putative uncharacterized protein; n=1; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3
GO:0005634 C nucleus
GO:0030528 F transcription regulator activity
GO:0045449 P regulation of transcription
GO:0005515 F protein binding
GO:0006952 P defense response
GO:0009279 C cell outer membrane
5310 BGIBMGA005310-TA
1719bp
 Bomo_Chr8
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000D56E52 (63%/222)
Cluster: PREDICTED: similar to CG1794-PA, isoform A; n=3; Endopterygota|Rep: PREDICTED: similar to CG1794-PA, isoform A - Tribolium castaneum
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005509 F calcium ion binding
GO:0005578 C proteinaceous extracellular matrix
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0030425 C dendrite
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