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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
5101 BGIBMGA005101-TA
1050bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q17241 (95%/349)
Cluster: Silk gland factor 1; n=3; Obtectomera|Rep: Silk gland factor 1 - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0043565 F sequence-specific DNA binding
GO:0000122 P negative regulation of transcription from RNA polymerase II promoter
GO:0001706 P endoderm formation
GO:0005515 F protein binding
GO:0006916 P anti-apoptosis
GO:0007275 P multicellular organismal development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007439 P ectodermal gut development
GO:0007443 P Malpighian tubule morphogenesis
5102 BGIBMGA005102-TA
3573bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000DB7E61 (44%/885)
Cluster: PREDICTED: similar to Kinesin-like protein at 3A CG8590-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to Kinesin-like protein at 3A CG8590-PA - Apis mellifera
5103 BGIBMGA005103-TA
384bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI00006CAFA6 (39%/46)
Cluster: jmjC domain containing protein; n=1; Tetrahymena thermophila SB210|Rep: jmjC domain containing protein - Tetrahymena thermophila SB210
GO:0008565 F protein transporter activity
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0003824 F catalytic activity
GO:0004114 F 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0007165 P signal transduction
GO:0016787 F hydrolase activity
5104 BGIBMGA005104-TA
195bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
(no hit)
5105 BGIBMGA005105-TA
4539bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000D56A6E (37%/419)
Cluster: PREDICTED: similar to CG2507-PB, isoform B; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2507-PB, isoform B - Tribolium castaneum
5106 BGIBMGA005106-TA
1884bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q9VZI3 (49%/649)
Cluster: Unc-112-related protein; n=9; Endopterygota|Rep: Unc-112-related protein - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0050839 F cell adhesion molecule binding
GO:0001725 C stress fiber
GO:0008360 P regulation of cell shape
GO:0030036 P actin cytoskeleton organization and biogenesis
GO:0000003 P reproduction
GO:0002119 P larval development (sensu Nematoda)
GO:0005198 F structural molecule activity
GO:0005886 C plasma membrane
GO:0007517 P muscle development
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0008340 P determination of adult life span
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0016020 C membrane
GO:0030055 C cell-matrix junction
GO:0040011 P locomotion
5107 BGIBMGA005107-TA
1017bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q06609 (76%/329)
Cluster: DNA repair protein RAD51 homolog 1; n=22; Eukaryota|Rep: DNA repair protein RAD51 homolog 1 - Homo sapiens (Human)
GO:0000150 F recombinase activity
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006268 P DNA unwinding during replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P response to DNA damage stimulus
GO:0007126 P meiosis
GO:0007131 P meiotic recombination
GO:0008022 F protein C-terminus binding
GO:0008094 F DNA-dependent ATPase activity
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0042802 F identical protein binding
GO:0043142 F single-stranded DNA-dependent ATPase activity
GO:0043565 F sequence-specific DNA binding
GO:0051106 P positive regulation of DNA ligation
GO:0051260 P protein homooligomerization
GO:0000228 C nuclear chromosome
GO:0000709 P meiotic joint molecule formation
GO:0000722 P telomere maintenance via recombination
GO:0030491 P heteroduplex formation
GO:0042148 P strand invasion
GO:0045002 P double-strand break repair via single-strand annealing
GO:0000075 P cell cycle checkpoint
GO:0007143 P female meiosis
GO:0007275 P multicellular organismal development
GO:0007294 P germarium-derived oocyte fate determination
GO:0008298 P intracellular mRNA localization
GO:0009949 P polarity specification of anterior/posterior axis
GO:0009951 P polarity specification of dorsal/ventral axis
GO:0009994 P oocyte differentiation
GO:0030717 P karyosome formation
GO:0045003 P double-strand break repair via synthesis-dependent strand annealing
5108 BGIBMGA005108-TA
510bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q9GV02 (87%/132)
Cluster: BmDSX-M; n=4; Bombyx mori|Rep: BmDSX-M - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007548 P sex differentiation
GO:0000122 P negative regulation of transcription from RNA polymerase II promoter
GO:0000398 P nuclear mRNA splicing, via spliceosome
GO:0003702 F RNA polymerase II transcription factor activity
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0006350 P transcription
GO:0007283 P spermatogenesis
GO:0007417 P central nervous system development
GO:0007483 P genital disc morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007486 P imaginal disc-derived female genitalia development
GO:0007530 P sex determination
GO:0007610 P behavior
GO:0007619 P courtship behavior
GO:0008049 P male courtship behavior
GO:0008270 F zinc ion binding
GO:0018993 P somatic sex determination
GO:0019101 P female somatic sex determination
GO:0019102 P male somatic sex determination
GO:0030154 P cell differentiation
GO:0030528 F transcription regulator activity
GO:0035215 P genital disc development
GO:0035263 P genital disc sexually dimorphic development
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045449 P regulation of transcription
GO:0045496 P male analia development
GO:0045497 P female analia development
GO:0045498 P sex comb development
GO:0045570 P regulation of imaginal disc growth
GO:0045892 P negative regulation of transcription, DNA-dependent
GO:0045893 P positive regulation of transcription, DNA-dependent
GO:0045944 P positive regulation of transcription from RNA polymerase II promoter
GO:0046660 P female sex differentiation
GO:0046661 P male sex differentiation
GO:0046872 F metal ion binding
GO:0048071 P sex-specific pigmentation
GO:0048086 P negative regulation of pigmentation
5109 BGIBMGA005109-TA
210bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
(no hit)
5110 BGIBMGA005110-TA
456bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000DB6FE7 (43%/137)
Cluster: PREDICTED: similar to CG15266-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG15266-PA - Apis mellifera
GO:0005515 F protein binding
GO:0006457 P protein folding
GO:0016272 C prefoldin complex
GO:0051082 F unfolded protein binding
GO:0000930 C gamma-tubulin complex
GO:0000226 P microtubule cytoskeleton organization and biogenesis
GO:0005634 C nucleus
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008017 F microtubule binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048487 F beta-tubulin binding
GO:0051297 P centrosome organization and biogenesis
GO:0051015 F actin filament binding
5111 BGIBMGA005111-TA
2241bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
(no hit)
5112 BGIBMGA005112-TA
363bp
 Bomo_Chr16
chromo25/Bm_scaf32
4385969bp
UniRef50_Q5P0E9 (38%/36)
Cluster: Putative uncharacterized protein; n=1; Azoarcus sp. EbN1|Rep: Putative uncharacterized protein - Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
GO:0003677 F DNA binding
GO:0000271 P polysaccharide biosynthetic process
GO:0005488 F binding
GO:0015774 P polysaccharide transport
GO:0016829 F lyase activity
5113 BGIBMGA005113-TA
1128bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI00015B5B2E (68%/241)
Cluster: PREDICTED: similar to ENSANGP00000010144; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000010144 - Nasonia vitripennis
GO:0004149 F dihydrolipoyllysine-residue succinyltransferase activity
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0008415 F acyltransferase activity
GO:0016740 F transferase activity
GO:0031405 F lipoic acid binding
GO:0045252 C oxoglutarate dehydrogenase complex
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006091 P generation of precursor metabolites and energy
5114 BGIBMGA005114-TA
4674bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000DB706A (40%/311)
Cluster: PREDICTED: similar to CG14322-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG14322-PA - Apis mellifera
5115 BGIBMGA005115-TA
609bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_P62820 (81%/203)
Cluster: Ras-related protein Rab-1A; n=163; Eukaryota|Rep: Ras-related protein Rab-1A - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016020 C membrane
GO:0005524 F ATP binding
GO:0005622 C intracellular
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008134 F transcription factor binding
5116 BGIBMGA005116-TA
2121bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_P28668 (61%/702)
Cluster: Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)]; n=14; Eukaryota|Rep: Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005625 C soluble fraction
GO:0006461 P protein complex assembly
5117 BGIBMGA005117-TA
2496bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_P28668 (54%/846)
Cluster: Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)]; n=14; Eukaryota|Rep: Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016874 F ligase activity
5118 BGIBMGA005118-TA
717bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI00003C04B9 (42%/228)
Cluster: PREDICTED: similar to CG8461-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG8461-PA - Apis mellifera
GO:0005515 F protein binding
5119 BGIBMGA005119-TA
3930bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000D56A6D (44%/663)
Cluster: PREDICTED: similar to CG5639-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG5639-PA - Tribolium castaneum
5120 BGIBMGA005120-TA
1371bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000DB6FDF (33%/353)
Cluster: PREDICTED: similar to Egl nine homolog 1 (Hypoxia-inducible factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2) (HIF-PH2) (HPH-2) (SM-20); n=3; Endopterygota|Rep: PREDICTED: similar to Egl nine homolog 1 (Hypoxia-inducible factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2) (HIF-PH2) (HPH-2) (SM-20) - Apis mellifera
GO:0008270 F zinc ion binding
GO:0016706 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0019538 P protein metabolic process
GO:0005515 F protein binding
5121 BGIBMGA005121-TA
675bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000DB6FDF (77%/108)
Cluster: PREDICTED: similar to Egl nine homolog 1 (Hypoxia-inducible factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2) (HIF-PH2) (HPH-2) (SM-20); n=3; Endopterygota|Rep: PREDICTED: similar to Egl nine homolog 1 (Hypoxia-inducible factor prolyl hydroxylase 2) (HIF-prolyl hydroxylase 2) (HIF-PH2) (HPH-2) (SM-20) - Apis mellifera
GO:0008270 F zinc ion binding
GO:0016706 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0019538 P protein metabolic process
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptosis
GO:0016491 F oxidoreductase activity
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0005829 C cytosol
5122 BGIBMGA005122-TA
456bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_A7S8J6 (31%/129)
Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis
GO:0005515 F protein binding
5123 BGIBMGA005123-TA
807bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000D55FF3 (21%/184)
Cluster: PREDICTED: similar to CG13972-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG13972-PA - Tribolium castaneum
5124 BGIBMGA005124-TA
1917bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q14738 (82%/393)
Cluster: Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform; n=163; Eukaryota|Rep: Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform - Homo sapiens (Human)
GO:0000159 C protein phosphatase type 2A complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0008601 F protein phosphatase type 2A regulator activity
5125 BGIBMGA005125-TA
1806bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000D56959 (46%/488)
Cluster: PREDICTED: similar to CG7602-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG7602-PA, isoform A - Tribolium castaneum
GO:0006281 P DNA repair
5126 BGIBMGA005126-TA
900bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI00015B4D9A (69%/291)
Cluster: PREDICTED: similar to tryptophanyl-tRNA synthetase; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to tryptophanyl-tRNA synthetase - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004830 F tryptophan-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005625 C soluble fraction
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006436 P tryptophanyl-tRNA aminoacylation
GO:0008285 P negative regulation of cell proliferation
GO:0016874 F ligase activity
5127 BGIBMGA005127-TA
705bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q9VHG3 (69%/75)
Cluster: CG12952-PA, isoform A; n=4; Sophophora|Rep: CG12952-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0030528 F transcription regulator activity
GO:0045449 P regulation of transcription
GO:0003677 F DNA binding
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007275 P multicellular organismal development
GO:0007417 P central nervous system development
GO:0007617 P mating behavior
GO:0030154 P cell differentiation
GO:0042698 P menstrual cycle
5128 BGIBMGA005128-TA
276bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000DB7344 (33%/57)
Cluster: PREDICTED: similar to sorting nexin 14; n=1; Apis mellifera|Rep: PREDICTED: similar to sorting nexin 14 - Apis mellifera
GO:0007155 P cell adhesion
GO:0005506 F iron ion binding
GO:0006118 P electron transport
GO:0009055 F electron carrier activity
GO:0020037 F heme binding
5129 BGIBMGA005129-TA
6309bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q9U8G8 (66%/666)
Cluster: Lacunin precursor; n=1; Manduca sexta|Rep: Lacunin precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005578 C proteinaceous extracellular matrix
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0030414 F protease inhibitor activity
GO:0031012 C extracellular matrix
5130 BGIBMGA005130-TA
2553bp
 Bomo_Chr25
chromo25/Bm_scaf32
4385969bp
UniRef50_Q16UT3 (31%/847)
Cluster: Papilin; n=1; Aedes aegypti|Rep: Papilin - Aedes aegypti (Yellowfever mosquito)
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005578 C proteinaceous extracellular matrix
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0030414 F protease inhibitor activity
GO:0031012 C extracellular matrix
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