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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
4411 BGIBMGA004411-TA
411bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI00015B625F (46%/134)
Cluster: PREDICTED: similar to CG18076-PB; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG18076-PB - Nasonia vitripennis
GO:0000226 P microtubule cytoskeleton organization and biogenesis
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005912 C adherens junction
GO:0007010 P cytoskeleton organization and biogenesis
GO:0007017 P microtubule-based process
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P cell cycle arrest
GO:0007409 P axonogenesis
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0008017 F microtubule binding
GO:0016203 P muscle attachment
GO:0016204 P determination of muscle attachment site
GO:0016319 P mushroom body development
GO:0030036 P actin cytoskeleton organization and biogenesis
GO:0030516 P regulation of axon extension
GO:0030716 P oocyte fate determination
GO:0035147 P branch fusion, open tracheal system
GO:0035149 P lumen formation, open tracheal system
GO:0045169 C fusome
GO:0048813 P dendrite morphogenesis
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0007016 P cytoskeletal anchoring
GO:0008307 F structural constituent of muscle
4412 BGIBMGA004412-TA
2277bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI00015B625F (49%/745)
Cluster: PREDICTED: similar to CG18076-PB; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG18076-PB - Nasonia vitripennis
4413 BGIBMGA004413-TA
441bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI0000DB6FAA (38%/144)
Cluster: PREDICTED: similar to short stop CG18076-PH, isoform H; n=1; Apis mellifera|Rep: PREDICTED: similar to short stop CG18076-PH, isoform H - Apis mellifera
GO:0000226 P microtubule cytoskeleton organization and biogenesis
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005912 C adherens junction
GO:0007010 P cytoskeleton organization and biogenesis
GO:0007017 P microtubule-based process
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P cell cycle arrest
GO:0007409 P axonogenesis
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0008017 F microtubule binding
GO:0016203 P muscle attachment
GO:0016204 P determination of muscle attachment site
GO:0016319 P mushroom body development
GO:0030036 P actin cytoskeleton organization and biogenesis
GO:0030516 P regulation of axon extension
GO:0030716 P oocyte fate determination
GO:0035147 P branch fusion, open tracheal system
GO:0035149 P lumen formation, open tracheal system
GO:0045169 C fusome
GO:0048813 P dendrite morphogenesis
4414 BGIBMGA004414-TA
5490bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_A1Z9J3 (41%/1189)
Cluster: CG18076-PH, isoform H; n=12; Drosophila melanogaster|Rep: CG18076-PH, isoform H - Drosophila melanogaster (Fruit fly)
GO:0000226 P microtubule cytoskeleton organization and biogenesis
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005912 C adherens junction
GO:0007010 P cytoskeleton organization and biogenesis
GO:0007017 P microtubule-based process
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P cell cycle arrest
GO:0007409 P axonogenesis
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0008017 F microtubule binding
GO:0016203 P muscle attachment
GO:0016204 P determination of muscle attachment site
GO:0016319 P mushroom body development
GO:0030036 P actin cytoskeleton organization and biogenesis
GO:0030516 P regulation of axon extension
GO:0030716 P oocyte fate determination
GO:0035147 P branch fusion, open tracheal system
GO:0035149 P lumen formation, open tracheal system
GO:0045169 C fusome
GO:0048813 P dendrite morphogenesis
4415 BGIBMGA004415-TA
3765bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI00015B625F (39%/1250)
Cluster: PREDICTED: similar to CG18076-PB; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG18076-PB - Nasonia vitripennis
4416 BGIBMGA004416-TA
4410bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI00015B625F (66%/1424)
Cluster: PREDICTED: similar to CG18076-PB; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG18076-PB - Nasonia vitripennis
4417 BGIBMGA004417-TA
867bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI00015B625F (51%/160)
Cluster: PREDICTED: similar to CG18076-PB; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG18076-PB - Nasonia vitripennis
GO:0000226 P microtubule cytoskeleton organization and biogenesis
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005912 C adherens junction
GO:0007010 P cytoskeleton organization and biogenesis
GO:0007017 P microtubule-based process
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P cell cycle arrest
GO:0007409 P axonogenesis
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0008017 F microtubule binding
GO:0016203 P muscle attachment
GO:0016204 P determination of muscle attachment site
GO:0016319 P mushroom body development
GO:0030036 P actin cytoskeleton organization and biogenesis
GO:0030516 P regulation of axon extension
GO:0030716 P oocyte fate determination
GO:0035147 P branch fusion, open tracheal system
GO:0035149 P lumen formation, open tracheal system
GO:0045169 C fusome
GO:0048813 P dendrite morphogenesis
4418 BGIBMGA004418-TA
561bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q54V71 (26%/82)
Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4
GO:0004252 F serine-type endopeptidase activity
GO:0004289 F subtilase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0031072 F heat shock protein binding
GO:0004871 F signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006915 P apoptosis
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007275 P multicellular organismal development
GO:0008063 P Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0019732 P antifungal humoral response
GO:0019904 F protein domain specific binding
GO:0030097 P hemopoiesis
GO:0035172 P hemocyte proliferation
GO:0045087 P innate immune response
4419 BGIBMGA004419-TA
645bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q2F5N2 (100%/214)
Cluster: Proteasome 26S non-ATPase subunit 9; n=1; Bombyx mori|Rep: Proteasome 26S non-ATPase subunit 9 - Bombyx mori (Silk moth)
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0043234 C protein complex
4420 BGIBMGA004420-TA
1071bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI0000D55B5F (35%/195)
Cluster: PREDICTED: similar to Caspase precursor (drICE); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Caspase precursor (drICE) - Tribolium castaneum
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0006915 P apoptosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010165 P response to X-ray
GO:0012501 P programmed cell death
GO:0016787 F hydrolase activity
GO:0030693 F caspase activity
GO:0046668 P regulation of retinal programmed cell death
GO:0048515 P spermatid differentiation
GO:0008083 F growth factor activity
4421 BGIBMGA004421-TA
717bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_A0MA79 (99%/235)
Cluster: TIN-ag-RP; n=1; Bombyx mori|Rep: TIN-ag-RP - Bombyx mori (Silk moth)
GO:0004197 F cysteine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008234 F cysteine-type peptidase activity
GO:0042600 C chorion
4422 BGIBMGA004422-TA
510bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q17GZ3 (40%/166)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0007318 P pole plasm protein localization
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
4423 BGIBMGA004423-TA
1533bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q7KRX5 (36%/117)
Cluster: CG12878-PB, isoform B; n=4; Sophophora|Rep: CG12878-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0007318 P pole plasm protein localization
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
4424 BGIBMGA004424-TA
672bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI0000DB6F84 (54%/142)
Cluster: PREDICTED: similar to orexin receptor 1; n=1; Apis mellifera|Rep: PREDICTED: similar to orexin receptor 1 - Apis mellifera
GO:0001584 F rhodopsin-like receptor activity
GO:0004871 F signal transducer activity
GO:0004872 F receptor activity
GO:0004930 F G-protein coupled receptor activity
GO:0005887 C integral to plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G-protein coupled receptor protein signaling pathway
GO:0007200 P G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)
GO:0007218 P neuropeptide signaling pathway
GO:0007268 P synaptic transmission
GO:0007631 P feeding behavior
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016499 F orexin receptor activity
4425 BGIBMGA004425-TA
852bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q9VLF5 (31%/237)
Cluster: CG9564-PA; n=4; Diptera|Rep: CG9564-PA - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0004252 F serine-type endopeptidase activity
GO:0004295 F trypsin activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
4426 BGIBMGA004426-TA
657bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_A5Y0C3 (25%/194)
Cluster: Facilitative hexose transporter 1; n=1; Nilaparvata lugens|Rep: Facilitative hexose transporter 1 - Nilaparvata lugens (Brown planthopper)
GO:0005215 F transporter activity
GO:0005351 F sugar:hydrogen ion symporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
4427 BGIBMGA004427-TA
576bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI00015B44CF (28%/150)
Cluster: PREDICTED: similar to ENSANGP00000023240; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000023240 - Nasonia vitripennis
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0005351 F sugar:hydrogen ion symporter activity
GO:0008643 P carbohydrate transport
4428 BGIBMGA004428-TA
432bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI00015B56AC (62%/110)
Cluster: PREDICTED: similar to hypocretin (orexin) receptor 2, partial; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to hypocretin (orexin) receptor 2, partial - Nasonia vitripennis
GO:0001584 F rhodopsin-like receptor activity
GO:0004871 F signal transducer activity
GO:0004872 F receptor activity
GO:0004930 F G-protein coupled receptor activity
GO:0005887 C integral to plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G-protein coupled receptor protein signaling pathway
GO:0007200 P G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)
GO:0007218 P neuropeptide signaling pathway
GO:0007268 P synaptic transmission
GO:0007631 P feeding behavior
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016499 F orexin receptor activity
4429 BGIBMGA004429-TA
768bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI0000D568B9 (50%/218)
Cluster: PREDICTED: similar to Orexin receptor type 2 (Ox2r) (Hypocretin receptor type 2); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Orexin receptor type 2 (Ox2r) (Hypocretin receptor type 2) - Tribolium castaneum
GO:0001584 F rhodopsin-like receptor activity
GO:0004871 F signal transducer activity
GO:0004872 F receptor activity
GO:0004930 F G-protein coupled receptor activity
GO:0005887 C integral to plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G-protein coupled receptor protein signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007268 P synaptic transmission
GO:0007631 P feeding behavior
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016499 F orexin receptor activity
4430 BGIBMGA004430-TA
1785bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_P18749 (31%/311)
Cluster: Oocyte zinc finger protein XlCOF6; n=4; Xenopus laevis|Rep: Oocyte zinc finger protein XlCOF6 - Xenopus laevis (African clawed frog)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4431 BGIBMGA004431-TA
1209bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI0000DB6F39 (30%/212)
Cluster: PREDICTED: similar to Zinc finger protein 62 homolog (Zfp-62) (ZT3); n=1; Apis mellifera|Rep: PREDICTED: similar to Zinc finger protein 62 homolog (Zfp-62) (ZT3) - Apis mellifera
4432 BGIBMGA004432-TA
1647bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q4SB63 (29%/270)
Cluster: Chromosome undetermined SCAF14677, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome undetermined SCAF14677, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
4433 BGIBMGA004433-TA
732bp
 Bomo_Chr27
chromo20/Bm_scaf37
4206046bp
UniRef50_A7SIK6 (31%/154)
Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis
4434 BGIBMGA004434-TA
294bp
 Bomo_Scaf019
chromo20/Bm_scaf37
4206046bp
UniRef50_Q0HXY3 (27%/70)
Cluster: Putative uncharacterized protein; n=1; Shewanella sp. MR-7|Rep: Putative uncharacterized protein - Shewanella sp. (strain MR-7)
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0006298 P mismatch repair
GO:0030983 F mismatched DNA binding
4435 BGIBMGA004435-TA
213bp
 Bomo_Scaf198
chromo20/Bm_scaf37
4206046bp
(no hit)
4436 BGIBMGA004436-TA
1350bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q7PWP0 (31%/432)
Cluster: ENSANGP00000013880; n=2; Culicidae|Rep: ENSANGP00000013880 - Anopheles gambiae str. PEST
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0005351 F sugar:hydrogen ion symporter activity
GO:0008643 P carbohydrate transport
4437 BGIBMGA004437-TA
279bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q16MT0 (30%/78)
Cluster: Putative uncharacterized protein; n=2; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
4438 BGIBMGA004438-TA
1059bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_Q8T0S3 (47%/364)
Cluster: GH11618p; n=7; Endopterygota|Rep: GH11618p - Drosophila melanogaster (Fruit fly)
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0000287 F magnesium ion binding
GO:0004307 F ethanolaminephosphotransferase activity
GO:0008430 F selenium binding
GO:0016021 C integral to membrane
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
4439 BGIBMGA004439-TA
303bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_O97111 (53%/102)
Cluster: CG5884-PA, isoform A; n=2; Sophophora|Rep: CG5884-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0001738 P morphogenesis of a polarized epithelium
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007155 P cell adhesion
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007309 P oocyte axis determination
GO:0007416 P synaptogenesis
GO:0008360 P regulation of cell shape
GO:0016324 C apical plasma membrane
GO:0016332 P establishment and/or maintenance of polarity of embryonic epithelium
GO:0035003 C subapical complex
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment and/or maintenance of neuroblast polarity
GO:0045197 P establishment and/or maintenance of epithelial cell polarity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005923 C tight junction
GO:0006461 P protein complex assembly
GO:0007043 P intercellular junction assembly
GO:0007049 P cell cycle
GO:0007163 P establishment and/or maintenance of cell polarity
GO:0007409 P axonogenesis
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030334 P regulation of cell migration
GO:0045177 C apical part of cell
GO:0051301 P cell division
4440 BGIBMGA004440-TA
639bp
 Bomo_Chr20
chromo20/Bm_scaf37
4206046bp
UniRef50_O97111 (62%/202)
Cluster: CG5884-PA, isoform A; n=2; Sophophora|Rep: CG5884-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0001738 P morphogenesis of a polarized epithelium
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007155 P cell adhesion
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007309 P oocyte axis determination
GO:0007416 P synaptogenesis
GO:0008360 P regulation of cell shape
GO:0016324 C apical plasma membrane
GO:0016332 P establishment and/or maintenance of polarity of embryonic epithelium
GO:0035003 C subapical complex
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment and/or maintenance of neuroblast polarity
GO:0045197 P establishment and/or maintenance of epithelial cell polarity
GO:0005923 C tight junction
GO:0007049 P cell cycle
GO:0007163 P establishment and/or maintenance of cell polarity
GO:0007275 P multicellular organismal development
GO:0007338 P single fertilization
GO:0007369 P gastrulation
GO:0007506 P gonadal mesoderm development
GO:0008406 P gonad development
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0030054 C cell junction
GO:0040001 P establishment of mitotic spindle localization
GO:0051301 P cell division
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006461 P protein complex assembly
GO:0007043 P intercellular junction assembly
GO:0007409 P axonogenesis
GO:0030334 P regulation of cell migration
GO:0045177 C apical part of cell
previous next from show/14623

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