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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
3211 BGIBMGA003211-TA
1368bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q17NP5 (41%/287)
Cluster: Rab geranylgeranyl transferase alpha subunit; n=2; Culicidae|Rep: Rab geranylgeranyl transferase alpha subunit - Aedes aegypti (Yellowfever mosquito)
GO:0008318 F protein prenyltransferase activity
GO:0016740 F transferase activity
GO:0018346 P protein amino acid prenylation
GO:0004659 F prenyltransferase activity
GO:0004663 F Rab-protein geranylgeranyltransferase activity
GO:0018342 P protein prenylation
GO:0018344 P protein geranylgeranylation
GO:0005515 F protein binding
GO:0006464 P protein modification process
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3212 BGIBMGA003212-TA
1149bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000DB75D3 (40%/393)
Cluster: PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M)...; n=1; Apis mellifera|Rep: PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M)... - Apis mellifera
GO:0000502 C proteasome complex (sensu Eukaryota)
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006510 P ATP-dependent proteolysis
GO:0016887 F ATPase activity
GO:0043234 C protein complex
GO:0000003 P reproduction
GO:0002119 P larval development (sensu Nematoda)
GO:0008150 P biological_process
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040016 P embryonic cleavage
GO:0005634 C nucleus
3213 BGIBMGA003213-TA
4902bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q22HL0 (20%/309)
Cluster: Mannosyl oligosaccharide glucosidase; n=2; Alveolata|Rep: Mannosyl oligosaccharide glucosidase - Tetrahymena thermophila SB210
GO:0003824 F catalytic activity
GO:0004573 F mannosyl-oligosaccharide glucosidase activity
GO:0008152 P metabolic process
GO:0009311 P oligosaccharide metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
3214 BGIBMGA003214-TA
2190bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q16K67 (36%/199)
Cluster: Mediator complex, 95kD-subunit, putative; n=2; Aedes aegypti|Rep: Mediator complex, 95kD-subunit, putative - Aedes aegypti (Yellowfever mosquito)
3215 BGIBMGA003215-TA
663bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
(no hit)
3216 BGIBMGA003216-TA
849bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q9W1Y0 (51%/138)
Cluster: GH14313p; n=3; Endopterygota|Rep: GH14313p - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0016020 C membrane
GO:0017111 F nucleoside-triphosphatase activity
GO:0030163 P protein catabolic process
GO:0005739 C mitochondrion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3217 BGIBMGA003217-TA
1551bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_UPI0000F1DE56 (27%/494)
Cluster: PREDICTED: hypothetical protein; n=13; Danio rerio|Rep: PREDICTED: hypothetical protein - Danio rerio
3218 BGIBMGA003218-TA
249bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q8C6I7 (37%/81)
Cluster: 10 days neonate olfactory brain cDNA, RIKEN full-length enriched library, clone:E530004P22 product:glutamic acid decarboxylase 1, full insert sequence; n=1; Mus musculus|Rep: 10 days neonate olfactory brain cDNA, RIKEN full-length enriched library, clone:E530004P22 product:glutamic acid decarboxylase 1, full insert sequence - Mus musculus (Mouse)
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0004351 F glutamate decarboxylase activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0006538 P glutamate catabolic process
GO:0006540 P glutamate decarboxylation to succinate
GO:0007268 P synaptic transmission
GO:0012506 C vesicle membrane
GO:0018352 P protein-pyridoxal-5-phosphate linkage
GO:0042136 P neurotransmitter biosynthetic process
3219 BGIBMGA003219-TA
882bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_O44102 (74%/191)
Cluster: Glutamic acid decarboxylase; n=2; obscura group|Rep: Glutamic acid decarboxylase - Drosophila pseudoobscura (Fruit fly)
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0004351 F glutamate decarboxylase activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0006538 P glutamate catabolic process
GO:0006540 P glutamate decarboxylation to succinate
GO:0007268 P synaptic transmission
GO:0012506 C vesicle membrane
GO:0018352 P protein-pyridoxal-5-phosphate linkage
GO:0042136 P neurotransmitter biosynthetic process
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
3220 BGIBMGA003220-TA
504bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_O44102 (76%/153)
Cluster: Glutamic acid decarboxylase; n=2; obscura group|Rep: Glutamic acid decarboxylase - Drosophila pseudoobscura (Fruit fly)
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0004351 F glutamate decarboxylase activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0006538 P glutamate catabolic process
GO:0006540 P glutamate decarboxylation to succinate
GO:0007268 P synaptic transmission
GO:0012506 C vesicle membrane
GO:0018352 P protein-pyridoxal-5-phosphate linkage
GO:0042136 P neurotransmitter biosynthetic process
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
3221 BGIBMGA003221-TA
1692bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q9SY72 (43%/485)
Cluster: F14N23.18; n=8; Eukaryota|Rep: F14N23.18 - Arabidopsis thaliana (Mouse-ear cress)
GO:0005525 F GTP binding
GO:0000074 P regulation of progression through cell cycle
GO:0000079 P regulation of cyclin-dependent protein kinase activity
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008156 P negative regulation of DNA replication
GO:0008285 P negative regulation of cell proliferation
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030336 P negative regulation of cell migration
GO:0031397 P negative regulation of protein ubiquitination
GO:0033342 P negative regulation of collagen binding
GO:0042254 P ribosome biogenesis and assembly
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
3222 BGIBMGA003222-TA
1134bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q9BSF8 (64%/318)
Cluster: BTB/POZ domain-containing protein 10; n=52; Eumetazoa|Rep: BTB/POZ domain-containing protein 10 - Homo sapiens (Human)
GO:0005249 F voltage-gated potassium channel activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006813 P potassium ion transport
GO:0008076 C voltage-gated potassium channel complex
GO:0016020 C membrane
3223 BGIBMGA003223-TA
2700bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_UPI0000D56705 (62%/173)
Cluster: PREDICTED: similar to CG9005-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG9005-PA - Tribolium castaneum
3224 BGIBMGA003224-TA
552bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q9VPN0 (29%/126)
Cluster: CG3625-PB, isoform B; n=4; Endopterygota|Rep: CG3625-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0016021 C integral to membrane
3225 BGIBMGA003225-TA
582bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_UPI00015B61C5 (59%/171)
Cluster: PREDICTED: similar to ENSANGP00000024376; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000024376 - Nasonia vitripennis
GO:0005515 F protein binding
GO:0030121 C AP-1 adaptor complex
GO:0030122 C AP-2 adaptor complex
GO:0001784 F phosphotyrosine binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0008022 F protein C-terminus binding
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009925 C basal plasma membrane
GO:0015460 F transport accessory protein activity
GO:0030159 F receptor signaling complex scaffold activity
GO:0030276 F clathrin binding
GO:0030674 F protein binding, bridging
GO:0042632 P cholesterol homeostasis
GO:0043393 P regulation of protein binding
GO:0048260 P positive regulation of receptor mediated endocytosis
3226 BGIBMGA003226-TA
1662bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q26618 (34%/311)
Cluster: SpZ12-1; n=1; Strongylocentrotus purpuratus|Rep: SpZ12-1 - Strongylocentrotus purpuratus (Purple sea urchin)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
3227 BGIBMGA003227-TA
288bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q7Q417 (58%/84)
Cluster: ENSANGP00000006849; n=3; Endopterygota|Rep: ENSANGP00000006849 - Anopheles gambiae str. PEST
GO:0005515 F protein binding
3228 BGIBMGA003228-TA
2136bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q17D90 (48%/589)
Cluster: Angiotensin-converting-relatedenzyme; n=2; Culicidae|Rep: Angiotensin-converting-relatedenzyme - Aedes aegypti (Yellowfever mosquito)
GO:0004246 F peptidyl-dipeptidase A activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0004180 F carboxypeptidase activity
GO:0005624 C membrane fraction
GO:0005625 C soluble fraction
GO:0005886 C plasma membrane
GO:0008015 P circulation
GO:0008217 P blood pressure regulation
GO:0008241 F peptidyl-dipeptidase activity
GO:0016021 C integral to membrane
GO:0046872 F metal ion binding
3229 BGIBMGA003229-TA
2358bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_O76819 (78%/417)
Cluster: 3-hydroxy-3-methylglutaryl-coenzyme A reductase; n=3; Obtectomera|Rep: 3-hydroxy-3-methylglutaryl-coenzyme A reductase - Agrotis ipsilon (Black cutworm moth)
GO:0004420 F hydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008299 P isoprenoid biosynthetic process
GO:0015936 P coenzyme A metabolic process
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050661 F NADP binding
GO:0050662 F coenzyme binding
GO:0005622 C intracellular
GO:0007280 P pole cell migration
GO:0008354 P germ cell migration
GO:0008406 P gonad development
GO:0035050 P embryonic heart tube development
GO:0035232 P germ cell attraction
3230 BGIBMGA003230-TA
4371bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_P52639 (28%/564)
Cluster: Large structural protein (L protein) (P180) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]; n=13; Borna disease virus|Rep: Large structural protein (L protein) (P180) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] - Borna disease virus (BDV)
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed RNA polymerase activity
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006370 P mRNA capping
GO:0006397 P mRNA processing
GO:0006410 P transcription, RNA-dependent
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019012 C virion
GO:0005737 C cytoplasm
3231 BGIBMGA003231-TA
507bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_A7S7M5 (24%/138)
Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis
3232 BGIBMGA003232-TA
204bp
 Bomo_Chr13
chromo2/Bm_scaf73
1903914bp
UniRef50_Q1IU29 (34%/46)
Cluster: ABC efflux pump, inner membrane subunit; n=2; Acidobacteria|Rep: ABC efflux pump, inner membrane subunit - Acidobacteria bacterium (strain Ellin345)
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008170 F N-methyltransferase activity
GO:0009007 F site-specific DNA-methyltransferase (adenine-specific) activity
GO:0032259 P methylation
GO:0006118 P electron transport
GO:0006725 P aromatic compound metabolic process
GO:0008198 F ferrous iron binding
GO:0016491 F oxidoreductase activity
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
3233 BGIBMGA003233-TA
990bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_UPI0000DB6C3C (49%/137)
Cluster: PREDICTED: similar to unplugged CG1650-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to unplugged CG1650-PA - Apis mellifera
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription
GO:0051960 P regulation of nervous system development
GO:0000228 C nuclear chromosome
3234 BGIBMGA003234-TA
282bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q9VQ27 (41%/39)
Cluster: CG14352-PA; n=2; Sophophora|Rep: CG14352-PA - Drosophila melanogaster (Fruit fly)
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0000166 F nucleotide binding
GO:0003774 F motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0019867 C outer membrane
3235 BGIBMGA003235-TA
654bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q6F103 (23%/97)
Cluster: Putative multidrug ABC transporter ATP-binding component; n=1; Mesoplasma florum|Rep: Putative multidrug ABC transporter ATP-binding component - Mesoplasma florum (Acholeplasma florum)
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
3236 BGIBMGA003236-TA
432bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_UPI0000D5694C (53%/132)
Cluster: PREDICTED: similar to CG2811-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2811-PA - Tribolium castaneum
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007507 P heart development
GO:0008150 P biological_process
GO:0008307 F structural constituent of muscle
3237 BGIBMGA003237-TA
993bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_UPI0000D56966 (47%/179)
Cluster: PREDICTED: similar to CG15561-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG15561-PA - Tribolium castaneum
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005622 C intracellular
3238 BGIBMGA003238-TA
438bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q9VQD7 (60%/140)
Cluster: CG3214-PA; n=9; Endopterygota|Rep: CG3214-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0006118 P electron transport
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0009055 F electron carrier activity
GO:0016020 C membrane
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0016491 F oxidoreductase activity
3239 BGIBMGA003239-TA
429bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_Q7Q6W7 (43%/129)
Cluster: ENSANGP00000021688; n=3; Culicidae|Rep: ENSANGP00000021688 - Anopheles gambiae str. PEST
GO:0003847 F 1-alkyl-2-acetylglycerophosphocholine esterase activity
GO:0008247 C 2-acetyl-1-alkylglycerophosphocholine esterase complex
GO:0016042 P lipid catabolic process
3240 BGIBMGA003240-TA
1290bp
 Bomo_Chr2
chromo2/Bm_scaf73
1903914bp
UniRef50_UPI00015B4673 (30%/260)
Cluster: PREDICTED: similar to ENSANGP00000012452; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000012452 - Nasonia vitripennis
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