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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
3181 BGIBMGA003181-TA
165bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q29QY7 (46%/54)
Cluster: IP15859p; n=2; Sophophora|Rep: IP15859p - Drosophila melanogaster (Fruit fly)
3182 BGIBMGA003182-TA
666bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B4DF9 (45%/211)
Cluster: PREDICTED: similar to LOC569692 protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to LOC569692 protein - Nasonia vitripennis
3183 BGIBMGA003183-TA
855bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q8N6M0 (40%/289)
Cluster: OTU domain-containing protein 6B; n=35; Eumetazoa|Rep: OTU domain-containing protein 6B - Homo sapiens (Human)
3184 BGIBMGA003184-TA
780bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9Y376 (77%/96)
Cluster: Calcium-binding protein 39; n=23; Coelomata|Rep: Calcium-binding protein 39 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005737 C cytoplasm
3185 BGIBMGA003185-TA
3558bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D560AF (44%/640)
Cluster: PREDICTED: similar to CG2225-PF, isoform F; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2225-PF, isoform F - Tribolium castaneum
3186 BGIBMGA003186-TA
1263bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q14240 (69%/406)
Cluster: Eukaryotic initiation factor 4A-II; n=37; Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006412 P translation
GO:0006446 P regulation of translational initiation
GO:0008026 F ATP-dependent helicase activity
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0000184 P mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005681 C spliceosome
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
3187 BGIBMGA003187-TA
921bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q7QJL7 (40%/188)
Cluster: ENSANGP00000010782; n=3; Culicidae|Rep: ENSANGP00000010782 - Anopheles gambiae str. PEST
3188 BGIBMGA003188-TA
2157bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56388 (70%/130)
Cluster: PREDICTED: similar to schwannomin interacting protein 1; n=2; Endopterygota|Rep: PREDICTED: similar to schwannomin interacting protein 1 - Tribolium castaneum
3189 BGIBMGA003189-TA
393bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_A4RI52 (47%/40)
Cluster: Putative uncharacterized protein; n=1; Magnaporthe grisea|Rep: Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016021 C integral to membrane
GO:0005351 F sugar:hydrogen ion symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0005506 F iron ion binding
GO:0006118 P electron transport
GO:0009055 F electron carrier activity
GO:0020037 F heme binding
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016874 F ligase activity
3190 BGIBMGA003190-TA
423bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B4ABA (75%/120)
Cluster: PREDICTED: similar to zinc finger protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to zinc finger protein - Nasonia vitripennis
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
3191 BGIBMGA003191-TA
894bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q29PJ7 (52%/275)
Cluster: GA10717-PA; n=4; Endopterygota|Rep: GA10717-PA - Drosophila pseudoobscura (Fruit fly)
GO:0006364 P rRNA processing
GO:0032040 C small subunit processome
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0042995 C cell projection
3192 BGIBMGA003192-TA
1581bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q86YT6 (65%/338)
Cluster: E3 ubiquitin-protein ligase MIB1; n=38; Eumetazoa|Rep: E3 ubiquitin-protein ligase MIB1 - Homo sapiens (Human)
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006512 P ubiquitin cycle
GO:0007219 P Notch signaling pathway
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0045665 P negative regulation of neuron differentiation
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
3193 BGIBMGA003193-TA
156bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q86YT6 (88%/50)
Cluster: E3 ubiquitin-protein ligase MIB1; n=38; Eumetazoa|Rep: E3 ubiquitin-protein ligase MIB1 - Homo sapiens (Human)
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006512 P ubiquitin cycle
GO:0007219 P Notch signaling pathway
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0045665 P negative regulation of neuron differentiation
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
3194 BGIBMGA003194-TA
1365bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q86YT6 (50%/318)
Cluster: E3 ubiquitin-protein ligase MIB1; n=38; Eumetazoa|Rep: E3 ubiquitin-protein ligase MIB1 - Homo sapiens (Human)
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006512 P ubiquitin cycle
GO:0007219 P Notch signaling pathway
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0045665 P negative regulation of neuron differentiation
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
3195 BGIBMGA003195-TA
2217bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_O45244 (61%/655)
Cluster: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4; n=4; Chromadorea|Rep: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 - Caenorhabditis elegans
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P larval development (sensu Nematoda)
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organismal development
GO:0007276 P gamete generation
GO:0008026 F ATP-dependent helicase activity
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0016787 F hydrolase activity
GO:0040007 P growth
GO:0040035 P hermaphrodite genitalia development
GO:0000074 P regulation of progression through cell cycle
GO:0003724 F RNA helicase activity
GO:0000398 P nuclear mRNA splicing, via spliceosome
GO:0004004 F ATP-dependent RNA helicase activity
3196 BGIBMGA003196-TA
1047bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_P61421 (80%/343)
Cluster: Vacuolar ATP synthase subunit d 1; n=61; Eukaryota|Rep: Vacuolar ATP synthase subunit d 1 - Homo sapiens (Human)
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008553 F hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015078 F hydrogen ion transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transport
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016471 C vacuolar proton-transporting V-type ATPase complex
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0046933 F hydrogen ion transporting ATP synthase activity, rotational mechanism
GO:0046961 F hydrogen ion transporting ATPase activity, rotational mechanism
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005515 F protein binding
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0007034 P vacuolar transport
GO:0007035 P vacuolar acidification
GO:0016020 C membrane
3197 BGIBMGA003197-TA
414bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_P41094 (86%/116)
Cluster: 40S ribosomal protein S18; n=137; Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005737 C cytoplasm
GO:0005811 C lipid particle
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0015935 C small ribosomal subunit
3198 BGIBMGA003198-TA
1443bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VR34 (54%/409)
Cluster: CG12194-PA; n=11; Endopterygota|Rep: CG12194-PA - Drosophila melanogaster (Fruit fly)
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0006810 P transport
GO:0016021 C integral to membrane
GO:0016020 C membrane
3199 BGIBMGA003199-TA
2736bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_P20711 (59%/479)
Cluster: Aromatic-L-amino-acid decarboxylase; n=565; Coelomata|Rep: Aromatic-L-amino-acid decarboxylase - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0004058 F aromatic-L-amino-acid decarboxylase activity
GO:0006519 P amino acid and derivative metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042423 P catecholamine biosynthetic process
GO:0004398 F histidine decarboxylase activity
GO:0005515 F protein binding
GO:0030424 C axon
GO:0043025 C cell soma
3200 BGIBMGA003200-TA
1077bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D55C47 (30%/173)
Cluster: PREDICTED: similar to CG33175-PG, isoform G; n=4; Endopterygota|Rep: PREDICTED: similar to CG33175-PG, isoform G - Tribolium castaneum
GO:0005618 C cell wall
GO:0008233 F peptidase activity
GO:0009986 C cell surface
3201 BGIBMGA003201-TA
1161bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B5D76 (23%/226)
Cluster: PREDICTED: similar to CG18255-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG18255-PA - Nasonia vitripennis
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0005388 F calcium-transporting ATPase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0006486 P protein amino acid glycosylation
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0006828 P manganese ion transport
GO:0008152 P metabolic process
GO:0015410 F manganese-transporting ATPase activity
GO:0015662 F ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO:0015992 P proton transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016787 F hydrolase activity
GO:0016820 F hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0045045 P secretory pathway
GO:0004665 F prephenate dehydrogenase (NADP+) activity
GO:0006571 P tyrosine biosynthetic process
3202 BGIBMGA003202-TA
1278bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56355 (44%/180)
Cluster: PREDICTED: similar to CG17299-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG17299-PA, isoform A - Tribolium castaneum
GO:0042632 P cholesterol homeostasis
3203 BGIBMGA003203-TA
342bp
 Bomo_Chr16
chromo4/Bm_scaf13
6731059bp
UniRef50_Q24262 (49%/106)
Cluster: Blastopia polyprotein; n=2; Drosophila melanogaster|Rep: Blastopia polyprotein - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0006278 P RNA-dependent DNA replication
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0004523 F ribonuclease H activity
3204 BGIBMGA003204-TA
153bp
 Bomo_Chr22
chromo4/Bm_scaf13
6731059bp
(no hit)
3205 BGIBMGA003205-TA
558bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D561D6 (49%/166)
Cluster: PREDICTED: similar to COP9 signalosome complex subunit 8 (Signalosome subunit 8) (SGN8) (JAB1-containing signalosome subunit 8) (COP9 homolog); n=1; Tribolium castaneum|Rep: PREDICTED: similar to COP9 signalosome complex subunit 8 (Signalosome subunit 8) (SGN8) (JAB1-containing signalosome subunit 8) (COP9 homolog) - Tribolium castaneum
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C signalosome
3206 BGIBMGA003206-TA
633bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9Y697 (78%/155)
Cluster: Cysteine desulfurase, mitochondrial precursor; n=147; cellular organisms|Rep: Cysteine desulfurase, mitochondrial precursor - Homo sapiens (Human)
GO:0000096 P sulfur amino acid metabolic process
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006461 P protein complex assembly
GO:0008152 P metabolic process
GO:0008483 F transaminase activity
GO:0016740 F transferase activity
GO:0030170 F pyridoxal phosphate binding
GO:0031071 F cysteine desulfurase activity
GO:0006534 P cysteine metabolic process
3207 BGIBMGA003207-TA
795bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_P92204 (28%/283)
Cluster: Negative elongation factor E; n=8; Endopterygota|Rep: Negative elongation factor E - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006368 P RNA elongation from RNA polymerase II promoter
GO:0007070 P negative regulation of transcription from RNA polymerase II promoter, mitotic
GO:0008023 C transcription elongation factor complex
GO:0008148 F negative transcription elongation factor activity
GO:0017053 C transcriptional repressor complex
GO:0008150 P biological_process
GO:0016787 F hydrolase activity
3208 BGIBMGA003208-TA
948bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q86P58 (69%/247)
Cluster: RE70568p; n=12; Eumetazoa|Rep: RE70568p - Drosophila melanogaster (Fruit fly)
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007399 P nervous system development
GO:0008045 P motor axon guidance
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription
GO:0046872 F metal ion binding
GO:0003702 F RNA polymerase II transcription factor activity
GO:0006350 P transcription
GO:0009887 P organ morphogenesis
3209 BGIBMGA003209-TA
1038bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q16FV5 (43%/188)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
3210 BGIBMGA003210-TA
2433bp
 Bomo_Chr9
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B4424 (70%/539)
Cluster: PREDICTED: similar to retrotransposon protein, putative, unclassified, partial; n=4; Nasonia vitripennis|Rep: PREDICTED: similar to retrotransposon protein, putative, unclassified, partial - Nasonia vitripennis
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