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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
3121 BGIBMGA003121-TA
966bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q16II1 (73%/195)
Cluster: Tata-box binding protein; n=2; Culicidae|Rep: Tata-box binding protein - Aedes aegypti (Yellowfever mosquito)
GO:0003677 F DNA binding
GO:0003702 F RNA polymerase II transcription factor activity
GO:0005488 F binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0003704 F specific RNA polymerase II transcription factor activity
GO:0005667 C transcription factor complex
GO:0006357 P regulation of transcription from RNA polymerase II promoter
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006366 P transcription from RNA polymerase II promoter
3122 BGIBMGA003122-TA
2529bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q7Q3F0 (49%/903)
Cluster: ENSANGP00000018403; n=2; Culicidae|Rep: ENSANGP00000018403 - Anopheles gambiae str. PEST
GO:0005515 F protein binding
3123 BGIBMGA003123-TA
831bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000DB6C76 (54%/228)
Cluster: PREDICTED: similar to CG6405-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG6405-PA - Apis mellifera
3124 BGIBMGA003124-TA
1776bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56288 (51%/549)
Cluster: PREDICTED: similar to CG2508-PA, partial; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2508-PA, partial - Tribolium castaneum
GO:0005488 F binding
GO:0005680 C anaphase-promoting complex
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0000074 P regulation of progression through cell cycle
GO:0000080 P G1 phase of mitotic cell cycle
GO:0004842 F ubiquitin-protein ligase activity
GO:0005622 C intracellular
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006512 P ubiquitin cycle
GO:0007049 P cell cycle
GO:0007067 P mitosis
GO:0007080 P mitotic metaphase plate congression
GO:0007091 P mitotic metaphase/anaphase transition
GO:0007096 P regulation of exit from mitosis
GO:0051301 P cell division
GO:0005515 F protein binding
GO:0005634 C nucleus
3125 BGIBMGA003125-TA
3636bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B5974 (43%/478)
Cluster: PREDICTED: similar to MGC115246 protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to MGC115246 protein - Nasonia vitripennis
3126 BGIBMGA003126-TA
2463bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q7QDG3 (47%/823)
Cluster: ENSANGP00000014233; n=2; Culicidae|Rep: ENSANGP00000014233 - Anopheles gambiae str. PEST
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0015031 P protein transport
GO:0051028 P mRNA transport
GO:0065002 P intracellular protein transport across a membrane
3127 BGIBMGA003127-TA
1299bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q7PSE7 (35%/212)
Cluster: ENSANGP00000003484; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000003484 - Anopheles gambiae str. PEST
3128 BGIBMGA003128-TA
234bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000DB759D (41%/58)
Cluster: PREDICTED: similar to CG5973-PC, isoform C; n=1; Apis mellifera|Rep: PREDICTED: similar to CG5973-PC, isoform C - Apis mellifera
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0006810 P transport
3129 BGIBMGA003129-TA
648bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VM12 (53%/210)
Cluster: CG5958-PA; n=19; Endopterygota|Rep: CG5958-PA - Drosophila melanogaster (Fruit fly)
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0006810 P transport
3130 BGIBMGA003130-TA
213bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q17LK8 (35%/59)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0005622 C intracellular
GO:0006810 P transport
GO:0003876 F AMP deaminase activity
GO:0016787 F hydrolase activity
3131 BGIBMGA003131-TA
468bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VM11 (54%/148)
Cluster: CG5973-PA, isoform A; n=5; Diptera|Rep: CG5973-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0006810 P transport
3132 BGIBMGA003132-TA
927bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00003BFB95 (51%/290)
Cluster: PREDICTED: similar to CG10026-PA, isoform A; n=4; Endopterygota|Rep: PREDICTED: similar to CG10026-PA, isoform A - Apis mellifera
GO:0005215 F transporter activity
GO:0005622 C intracellular
GO:0006810 P transport
3133 BGIBMGA003133-TA
651bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56349 (45%/205)
Cluster: PREDICTED: similar to RAS-like family 11 member B; n=1; Tribolium castaneum|Rep: PREDICTED: similar to RAS-like family 11 member B - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
3134 BGIBMGA003134-TA
582bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56390 (71%/157)
Cluster: PREDICTED: similar to CG5545-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG5545-PA - Tribolium castaneum
GO:0005634 C nucleus
GO:0030528 F transcription regulator activity
GO:0045449 P regulation of transcription
GO:0005515 F protein binding
3135 BGIBMGA003135-TA
2241bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56391 (45%/408)
Cluster: PREDICTED: similar to CG4272-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG4272-PA, isoform A - Tribolium castaneum
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006915 P apoptosis
3136 BGIBMGA003136-TA
600bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q8SYU0 (45%/153)
Cluster: RE34039p; n=5; Endopterygota|Rep: RE34039p - Drosophila melanogaster (Fruit fly)
3137 BGIBMGA003137-TA
153bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B4C51 (80%/21)
Cluster: PREDICTED: similar to monocarboxylate transporter; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to monocarboxylate transporter - Nasonia vitripennis
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016021 C integral to membrane
3138 BGIBMGA003138-TA
1521bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q16ZX4 (49%/511)
Cluster: Monocarboxylate transporter; n=2; Endopterygota|Rep: Monocarboxylate transporter - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016021 C integral to membrane
3139 BGIBMGA003139-TA
1176bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D561EE (33%/409)
Cluster: PREDICTED: similar to CG33548-PB, isoform B; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG33548-PB, isoform B - Tribolium castaneum
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
3140 BGIBMGA003140-TA
285bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D561EE (40%/49)
Cluster: PREDICTED: similar to CG33548-PB, isoform B; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG33548-PB, isoform B - Tribolium castaneum
GO:0005634 C nucleus
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0006529 P asparagine biosynthetic process
3141 BGIBMGA003141-TA
729bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_A4FB38 (48%/202)
Cluster: Putative peptidase; n=1; Saccharopolyspora erythraea NRRL 2338|Rep: Putative peptidase - Saccharopolyspora erythraea (strain NRRL 23338)
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0016805 F dipeptidase activity
GO:0017165 F dipeptidase E activity
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0008233 F peptidase activity
3142 BGIBMGA003142-TA
1536bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9HCS7 (59%/364)
Cluster: XPA-binding protein 2; n=30; Coelomata|Rep: XPA-binding protein 2 - Homo sapiens (Human)
GO:0001824 P blastocyst development
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0005681 C spliceosome
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006350 P transcription
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006974 P response to DNA damage stimulus
GO:0008380 P RNA splicing
GO:0000003 P reproduction
GO:0000910 P cytokinesis
GO:0001703 P gastrulation with mouth forming first
GO:0002119 P larval development (sensu Nematoda)
GO:0008150 P biological_process
GO:0009790 P embryonic development
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040016 P embryonic cleavage
3143 BGIBMGA003143-TA
1656bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9W3F7 (52%/340)
Cluster: CG12125-PA; n=7; Diptera|Rep: CG12125-PA - Drosophila melanogaster (Fruit fly)
GO:0016020 C membrane
GO:0016021 C integral to membrane
3144 BGIBMGA003144-TA
3969bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B537E (39%/1016)
Cluster: PREDICTED: similar to conserved hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to conserved hypothetical protein - Nasonia vitripennis
3145 BGIBMGA003145-TA
3111bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000DB771E (43%/893)
Cluster: PREDICTED: similar to CG8486-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to CG8486-PA, isoform A - Apis mellifera
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral to membrane
3146 BGIBMGA003146-TA
2187bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D55FBF (78%/255)
Cluster: PREDICTED: similar to CG11063-PB; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11063-PB - Tribolium castaneum
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3147 BGIBMGA003147-TA
645bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q7Q4C0 (65%/149)
Cluster: ENSANGP00000018263; n=2; Culicidae|Rep: ENSANGP00000018263 - Anopheles gambiae str. PEST
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
3148 BGIBMGA003148-TA
234bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q316B6 (33%/39)
Cluster: Methylase involved in ubiquinone/menaquinone biosynthesis-like; n=1; Desulfovibrio desulfuricans G20|Rep: Methylase involved in ubiquinone/menaquinone biosynthesis-like - Desulfovibrio desulfuricans (strain G20)
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0008270 F zinc ion binding
GO:0000166 F nucleotide binding
GO:0001514 P selenocysteine incorporation
GO:0003723 F RNA binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0003700 F transcription factor activity
GO:0003824 F catalytic activity
GO:0005622 C intracellular
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0009058 P biosynthetic process
GO:0016769 F transferase activity, transferring nitrogenous groups
GO:0030170 F pyridoxal phosphate binding
3149 BGIBMGA003149-TA
192bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000DB7585 (46%/63)
Cluster: PREDICTED: hypothetical protein; n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein - Apis mellifera
GO:0005515 F protein binding
GO:0005215 F transporter activity
GO:0006810 P transport
3150 BGIBMGA003150-TA
399bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q4S157 (28%/96)
Cluster: Chromosome 13 SCAF14769, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 13 SCAF14769, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0001584 F rhodopsin-like receptor activity
GO:0004981 F muscarinic acetylcholine receptor activity
GO:0007186 P G-protein coupled receptor protein signaling pathway
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0003824 F catalytic activity
GO:0004072 F aspartate kinase activity
GO:0004412 F homoserine dehydrogenase activity
GO:0008152 P metabolic process
GO:0008652 P amino acid biosynthetic process
GO:0009067 P aspartate family amino acid biosynthetic process
GO:0009088 P threonine biosynthetic process
GO:0016301 F kinase activity
GO:0016491 F oxidoreductase activity
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P response to DNA damage stimulus
GO:0007126 P meiosis
GO:0016787 F hydrolase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
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