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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2971 BGIBMGA002971-TA
1038bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D561C0 (48%/338)
Cluster: PREDICTED: similar to Catecholamines up protein; n=1; Tribolium castaneum|Rep: PREDICTED: similar to Catecholamines up protein - Tribolium castaneum
GO:0016020 C membrane
GO:0030001 P metal ion transport
GO:0046873 F metal ion transmembrane transporter activity
2972 BGIBMGA002972-TA
2559bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B46F9 (68%/869)
Cluster: PREDICTED: similar to importin beta-1; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to importin beta-1 - Nasonia vitripennis
GO:0005515 F protein binding
GO:0000059 P protein import into nucleus, docking
GO:0000060 P protein import into nucleus, translocation
GO:0005488 F binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing substrate import into nucleus
GO:0006610 P ribosomal protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0008565 F protein transporter activity
GO:0015031 P protein transport
2973 BGIBMGA002973-TA
840bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B557F (58%/251)
Cluster: PREDICTED: similar to interphase cyctoplasmic foci protein 45; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to interphase cyctoplasmic foci protein 45 - Nasonia vitripennis
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008193 F tRNA guanylyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
2974 BGIBMGA002974-TA
1311bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B57E5 (45%/440)
Cluster: PREDICTED: similar to GA15161-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to GA15161-PA - Nasonia vitripennis
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
2975 BGIBMGA002975-TA
885bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B4C1D (65%/286)
Cluster: PREDICTED: similar to ENSANGP00000015285; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000015285 - Nasonia vitripennis
GO:0003735 F structural constituent of ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0005622 C intracellular
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0002119 P larval development (sensu Nematoda)
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040019 P positive regulation of embryonic development
2976 BGIBMGA002976-TA
1104bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VLU5 (39%/303)
Cluster: WW domain-containing oxidoreductase; n=8; Endopterygota|Rep: WW domain-containing oxidoreductase - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0010212 P response to ionizing radiation
GO:0016491 F oxidoreductase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0006118 P electron transport
GO:0007049 P cell cycle
GO:0008202 P steroid metabolic process
GO:0045786 P negative regulation of progression through cell cycle
GO:0046983 F protein dimerization activity
GO:0048037 F cofactor binding
GO:0050662 F coenzyme binding
2977 BGIBMGA002977-TA
1563bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000519BEC (48%/569)
Cluster: PREDICTED: similar to CG6191-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG6191-PA - Apis mellifera
GO:0000074 P regulation of progression through cell cycle
GO:0016538 F cyclin-dependent protein kinase regulator activity
GO:0051302 P regulation of cell division
GO:0051726 P regulation of cell cycle
2978 BGIBMGA002978-TA
1746bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q92544 (60%/598)
Cluster: Transmembrane 9 superfamily protein member 4; n=49; Bilateria|Rep: Transmembrane 9 superfamily protein member 4 - Homo sapiens (Human)
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0005794 C Golgi apparatus
GO:0005768 C endosome
GO:0005887 C integral to plasma membrane
GO:0006810 P transport
2979 BGIBMGA002979-TA
825bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_O97166 (43%/265)
Cluster: 3-alpha-hydroxysteroid dehydrogenase-like protein; n=1; Branchiostoma floridae|Rep: 3-alpha-hydroxysteroid dehydrogenase-like protein - Branchiostoma floridae (Florida lancelet) (Amphioxus)
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
2980 BGIBMGA002980-TA
1221bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D560AD (44%/412)
Cluster: PREDICTED: similar to CG31886-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG31886-PA - Tribolium castaneum
2981 BGIBMGA002981-TA
381bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_P25843 (72%/126)
Cluster: Profilin; n=11; Pancrustacea|Rep: Profilin - Drosophila melanogaster (Fruit fly)
GO:0000902 P cell morphogenesis
GO:0000910 P cytokinesis
GO:0000915 P cytokinesis, contractile ring formation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007010 P cytoskeleton organization and biogenesis
GO:0007015 P actin filament organization
GO:0007283 P spermatogenesis
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007391 P dorsal closure
GO:0007420 P brain development
GO:0015629 C actin cytoskeleton
GO:0030036 P actin cytoskeleton organization and biogenesis
GO:0030041 P actin filament polymerization
GO:0030717 P karyosome formation
GO:0035193 P larval central nervous system remodeling
GO:0045451 P pole plasm oskar mRNA localization
GO:0006907 P pinocytosis
GO:0006928 P cell motility
GO:0019953 P sexual reproduction
GO:0030587 P fruiting body development (sensu Dictyosteliida)
GO:0030837 P negative regulation of actin filament polymerization
GO:0042989 P sequestering of actin monomers
GO:0050765 P negative regulation of phagocytosis
2982 BGIBMGA002982-TA
537bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9XI36 (27%/77)
Cluster: F9L1.28 protein; n=3; Arabidopsis thaliana|Rep: F9L1.28 protein - Arabidopsis thaliana (Mouse-ear cress)
GO:0003677 F DNA binding
2983 BGIBMGA002983-TA
4644bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56358 (70%/138)
Cluster: PREDICTED: similar to WD repeat domain 5B; n=1; Tribolium castaneum|Rep: PREDICTED: similar to WD repeat domain 5B - Tribolium castaneum
2984 BGIBMGA002984-TA
1743bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q99MN1 (68%/533)
Cluster: Lysyl-tRNA synthetase; n=92; Eukaryota|Rep: Lysyl-tRNA synthetase - Mus musculus (Mouse)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004815 F aspartate-tRNA ligase activity
GO:0004824 F lysine-tRNA ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006422 P aspartyl-tRNA aminoacylation
GO:0006430 P lysyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0005625 C soluble fraction
2985 BGIBMGA002985-TA
678bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VXP4 (58%/225)
Cluster: Platelet-activating factor acetylhydrolase IB subunit beta homolog; n=6; Endopterygota|Rep: Platelet-activating factor acetylhydrolase IB subunit beta homolog - Drosophila melanogaster (Fruit fly)
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016787 F hydrolase activity
GO:0003847 F 1-alkyl-2-acetylglycerophosphocholine esterase activity
GO:0005515 F protein binding
GO:0005625 C soluble fraction
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0016042 P lipid catabolic process
GO:0016788 F hydrolase activity, acting on ester bonds
2986 BGIBMGA002986-TA
1329bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VY42 (53%/412)
Cluster: CG1461-PA; n=5; Endopterygota|Rep: CG1461-PA - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0004838 F tyrosine transaminase activity
GO:0005515 F protein binding
GO:0006519 P amino acid and derivative metabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016769 F transferase activity, transferring nitrogenous groups
GO:0016847 F 1-aminocyclopropane-1-carboxylate synthase activity
GO:0030170 F pyridoxal phosphate binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0009074 P aromatic amino acid family catabolic process
GO:0016740 F transferase activity
2987 BGIBMGA002987-TA
519bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VNQ3 (62%/172)
Cluster: CG11137-PA; n=10; Arthropoda|Rep: CG11137-PA - Drosophila melanogaster (Fruit fly)
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0000003 P reproduction
GO:0002119 P larval development (sensu Nematoda)
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040007 P growth
2988 BGIBMGA002988-TA
525bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VKC2 (55%/162)
Cluster: CG12317-PA, isoform A; n=4; Diptera|Rep: CG12317-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0005887 C integral to plasma membrane
GO:0006461 P protein complex assembly
GO:0006520 P amino acid metabolic process
2989 BGIBMGA002989-TA
1239bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_O75306 (57%/412)
Cluster: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial precursor; n=305; cellular organisms|Rep: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial precursor - Homo sapiens (Human)
GO:0003954 F NADH dehydrogenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006118 P electron transport
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0006979 P response to oxidative stress
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0009055 F electron carrier activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NADH or NADPH
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
2990 BGIBMGA002990-TA
684bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D5619C (47%/224)
Cluster: PREDICTED: similar to CG3077-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG3077-PA - Tribolium castaneum
GO:0005515 F protein binding
GO:0007154 P cell communication
GO:0035091 F phosphoinositide binding
2991 BGIBMGA002991-TA
363bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q3E041 (29%/75)
Cluster: Transcription-repair coupling factor; n=2; Chloroflexus|Rep: Transcription-repair coupling factor - Chloroflexus aurantiacus J-10-fl
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003684 F damaged DNA binding
GO:0003700 F transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008026 F ATP-dependent helicase activity
GO:0016787 F hydrolase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
2992 BGIBMGA002992-TA
237bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_A5C567 (33%/72)
Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape)
GO:0003676 F nucleic acid binding
GO:0006810 P transport
GO:0004497 F monooxygenase activity
GO:0006118 P electron transport
GO:0006725 P aromatic compound metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0018666 F 2,4-dichlorophenol 6-monooxygenase activity
GO:0009306 P protein secretion
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
2993 BGIBMGA002993-TA
534bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000DB70EC (77%/45)
Cluster: PREDICTED: similar to H15 CG6604-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to H15 CG6604-PA - Apis mellifera
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0045449 P regulation of transcription
GO:0007507 P heart development
GO:0035050 P embryonic heart tube development
GO:0042684 P cardioblast cell fate commitment
2994 BGIBMGA002994-TA
498bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D5619F (81%/145)
Cluster: PREDICTED: similar to CG6604-PA; n=4; Endopterygota|Rep: PREDICTED: similar to CG6604-PA - Tribolium castaneum
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0045449 P regulation of transcription
GO:0001569 P patterning of blood vessels
GO:0001947 P heart looping
GO:0005515 F protein binding
GO:0006350 P transcription
GO:0006936 P muscle contraction
GO:0008015 P circulation
GO:0008283 P cell proliferation
GO:0009953 P dorsal/ventral pattern formation
GO:0016563 F transcription activator activity
GO:0035050 P embryonic heart tube development
GO:0045892 P negative regulation of transcription, DNA-dependent
GO:0045893 P positive regulation of transcription, DNA-dependent
2995 BGIBMGA002995-TA
513bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B6131 (69%/86)
Cluster: PREDICTED: similar to T-box protein H15-2; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to T-box protein H15-2 - Nasonia vitripennis
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0045449 P regulation of transcription
GO:0007507 P heart development
GO:0035050 P embryonic heart tube development
GO:0042684 P cardioblast cell fate commitment
2996 BGIBMGA002996-TA
1290bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VR52 (51%/341)
Cluster: CG14620-PA; n=4; Diptera|Rep: CG14620-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0007605 P sensory perception of sound
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0050910 P detection of mechanical stimulus during sensory perception of sound
2997 BGIBMGA002997-TA
738bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D561A3 (57%/211)
Cluster: PREDICTED: similar to PQ loop repeat containing 1; n=2; Endopterygota|Rep: PREDICTED: similar to PQ loop repeat containing 1 - Tribolium castaneum
GO:0016020 C membrane
GO:0016021 C integral to membrane
2998 BGIBMGA002998-TA
738bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000DB7D92 (42%/221)
Cluster: PREDICTED: similar to T16G12.5, partial; n=1; Apis mellifera|Rep: PREDICTED: similar to T16G12.5, partial - Apis mellifera
GO:0016020 C membrane
GO:0016021 C integral to membrane
2999 BGIBMGA002999-TA
735bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D5638C (36%/247)
Cluster: PREDICTED: similar to Tetraspanin-7 (Tspan-7) (Transmembrane 4 superfamily member 2) (Cell surface glycoprotein A15) (PE31) (TALLA homolog); n=3; Endopterygota|Rep: PREDICTED: similar to Tetraspanin-7 (Tspan-7) (Transmembrane 4 superfamily member 2) (Cell surface glycoprotein A15) (PE31) (TALLA homolog) - Tribolium castaneum
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0005886 C plasma membrane
GO:0005887 C integral to plasma membrane
GO:0006487 P protein amino acid N-linked glycosylation
3000 BGIBMGA003000-TA
3237bp
 Bomo_Chr4
chromo4/Bm_scaf13
6731059bp
UniRef50_Q7Q4I8 (60%/556)
Cluster: ENSANGP00000006622; n=2; Culicidae|Rep: ENSANGP00000006622 - Anopheles gambiae str. PEST
GO:0005097 F Rab GTPase activator activity
GO:0005622 C intracellular
GO:0032313 P regulation of Rab GTPase activity
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