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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2551 BGIBMGA002551-TA
2310bp
 Bomo_Chr9
chromo9/Bm_scaf14
6760189bp
UniRef50_P28166 (34%/824)
Cluster: Zinc finger protein 1; n=3; Drosophila melanogaster|Rep: Zinc finger protein 1 - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007280 P pole cell migration
GO:0007399 P nervous system development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007514 P garland cell differentiation
GO:0008045 P motor axon guidance
GO:0008270 F zinc ion binding
GO:0008354 P germ cell migration
GO:0008406 P gonad development
GO:0019730 P antimicrobial humoral response
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription
GO:0046872 F metal ion binding
GO:0048542 P lymph gland development
2552 BGIBMGA002552-TA
4686bp
 Bomo_Chr9
chromo9/Bm_scaf14
6760189bp
UniRef50_Q16QA1 (38%/255)
Cluster: Putative uncharacterized protein; n=3; Endopterygota|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005515 F protein binding
2553 BGIBMGA002553-TA
159bp
 Bomo_Chr9
chromo9/Bm_scaf14
6760189bp
UniRef50_Q44Q52 (45%/33)
Cluster: Glycosyl transferase, group 1 precursor; n=4; Chlorobium/Pelodictyon group|Rep: Glycosyl transferase, group 1 precursor - Chlorobium limicola DSM 245
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0009168 P purine ribonucleoside monophosphate biosynthetic process
GO:0019239 F deaminase activity
GO:0019012 C virion
GO:0019033 C viral tegument
GO:0008168 F methyltransferase activity
2554 BGIBMGA002554-TA
261bp
 Bomo_Chr9
chromo9/Bm_scaf14
6760189bp
UniRef50_A2R2X8 (39%/43)
Cluster: Similarity: the similarities are mainly based on repetetive structures; n=5; Trichocomaceae|Rep: Similarity: the similarities are mainly based on repetetive structures - Aspergillus niger
GO:0003824 F catalytic activity
GO:0005515 F protein binding
2555 BGIBMGA002555-TA
543bp
 Bomo_Chr9
chromo9/Bm_scaf14
6760189bp
UniRef50_Q8YT34 (29%/54)
Cluster: Alr2892 protein; n=2; Nostocaceae|Rep: Alr2892 protein - Anabaena sp. (strain PCC 7120)
GO:0000155 F two-component sensor activity
GO:0000156 F two-component response regulator activity
GO:0000160 P two-component signal transduction system (phosphorelay)
GO:0003824 F catalytic activity
GO:0004673 F protein histidine kinase activity
GO:0004871 F signal transducer activity
GO:0005524 F ATP binding
GO:0006355 P regulation of transcription, DNA-dependent
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
GO:0006470 P protein amino acid dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016791 F phosphoric monoester hydrolase activity
2556 BGIBMGA002556-TA
1482bp
 Bomo_Chr9
chromo9/Bm_scaf14
6760189bp
UniRef50_P91766 (78%/301)
Cluster: Acetylcholine receptor subunit alpha-like precursor; n=31; Coelomata|Rep: Acetylcholine receptor subunit alpha-like precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0004872 F receptor activity
GO:0004889 F nicotinic acetylcholine-activated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
2557 BGIBMGA002557-TA
534bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q97U90 (32%/56)
Cluster: Iron-sulfur protein, conserved putative; n=5; Thermoprotei|Rep: Iron-sulfur protein, conserved putative - Sulfolobus solfataricus
GO:0006118 P electron transport
GO:0009055 F electron carrier activity
GO:0016491 F oxidoreductase activity
GO:0051536 F iron-sulfur cluster binding
GO:0005506 F iron ion binding
GO:0046872 F metal ion binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
2558 BGIBMGA002558-TA
534bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q9W2Q5 (55%/177)
Cluster: CG9236-PA; n=2; Sophophora|Rep: CG9236-PA - Drosophila melanogaster (Fruit fly)
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
2559 BGIBMGA002559-TA
456bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_P35128 (79%/151)
Cluster: Ubiquitin-conjugating enzyme E2-17 kDa; n=30; Eukaryota|Rep: Ubiquitin-conjugating enzyme E2-17 kDa - Drosophila melanogaster (Fruit fly)
GO:0004842 F ubiquitin-protein ligase activity
GO:0006464 P protein modification process
GO:0006512 P ubiquitin cycle
GO:0007409 P axonogenesis
GO:0007412 P axon target recognition
GO:0007625 P grooming behavior
GO:0007629 P flight behavior
GO:0007630 P jump response
GO:0008594 P photoreceptor cell morphogenesis
GO:0016874 F ligase activity
GO:0019787 F small conjugating protein ligase activity
GO:0000724 P double-strand break repair via homologous recombination
GO:0000729 P DNA double-strand break processing
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006301 P postreplication repair
GO:0006508 P proteolysis
GO:0006974 P response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016574 P histone ubiquitination
GO:0031058 P positive regulation of histone modification
GO:0031372 C UBC13-MMS2 complex
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB cascade
GO:0043130 F ubiquitin binding
GO:0045739 P positive regulation of DNA repair
GO:0050852 P T cell receptor signaling pathway
GO:0051092 P activation of NF-kappaB transcription factor
GO:0051443 P positive regulation of ubiquitin-protein ligase activity
2560 BGIBMGA002560-TA
516bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q8IR45 (53%/178)
Cluster: UPF0402 protein CG32590; n=6; Endopterygota|Rep: UPF0402 protein CG32590 - Drosophila melanogaster (Fruit fly)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0005515 F protein binding
2561 BGIBMGA002561-TA
372bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
(no hit)
2562 BGIBMGA002562-TA
1272bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_UPI0000DA2538 (26%/160)
Cluster: PREDICTED: similar to mucin 17; n=1; Rattus norvegicus|Rep: PREDICTED: similar to mucin 17 - Rattus norvegicus
2563 BGIBMGA002563-TA
378bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q8GDR7 (40%/32)
Cluster: COME operon protein 3; n=1; Heliobacillus mobilis|Rep: COME operon protein 3 - Heliobacillus mobilis
2564 BGIBMGA002564-TA
792bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_A1KXC1 (25%/119)
Cluster: DFP1; n=1; Dermatophagoides farinae|Rep: DFP1 - Dermatophagoides farinae (House-dust mite)
GO:0002009 P morphogenesis of an epithelium
GO:0005578 C proteinaceous extracellular matrix
GO:0007507 P heart development
GO:0006357 P regulation of transcription from RNA polymerase II promoter
GO:0030014 C CCR4-NOT complex
2565 BGIBMGA002565-TA
747bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q1DLN1 (36%/63)
Cluster: Predicted protein; n=1; Coccidioides immitis|Rep: Predicted protein - Coccidioides immitis
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0030528 F transcription regulator activity
GO:0045449 P regulation of transcription
GO:0004518 F nuclease activity
2566 BGIBMGA002566-TA
1506bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
(no hit)
2567 BGIBMGA002567-TA
612bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
(no hit)
2568 BGIBMGA002568-TA
300bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q4QCV5 (38%/47)
Cluster: Putative uncharacterized protein; n=2; Leishmania|Rep: Putative uncharacterized protein - Leishmania major
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0006810 P transport
2569 BGIBMGA002569-TA
1260bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q15084 (55%/418)
Cluster: Protein disulfide-isomerase A6 precursor; n=54; Eumetazoa|Rep: Protein disulfide-isomerase A6 precursor - Homo sapiens (Human)
GO:0003756 F protein disulfide isomerase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005793 C ER-Golgi intermediate compartment
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
2570 BGIBMGA002570-TA
1392bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q1HQN9 (62%/442)
Cluster: Olygosaccharyltransferase alpha subunit; n=3; Endopterygota|Rep: Olygosaccharyltransferase alpha subunit - Aedes aegypti (Yellowfever mosquito)
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0006486 P protein amino acid glycosylation
GO:0016021 C integral to membrane
GO:0016740 F transferase activity
GO:0003723 F RNA binding
GO:0005789 C endoplasmic reticulum membrane
GO:0006464 P protein modification process
GO:0008250 C oligosaccharyl transferase complex
GO:0016020 C membrane
GO:0018279 P protein amino acid N-linked glycosylation via asparagine
GO:0030867 C rough endoplasmic reticulum membrane
2571 BGIBMGA002571-TA
978bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q6NXV1 (43%/244)
Cluster: EG435970 protein; n=19; Euteleostomi|Rep: EG435970 protein - Mus musculus (Mouse)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2572 BGIBMGA002572-TA
708bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_P36241 (66%/198)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit (sensu Eukaryota)
2573 BGIBMGA002573-TA
2061bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q7KML2 (44%/685)
Cluster: BcDNA.GH07485; n=11; Endopterygota|Rep: BcDNA.GH07485 - Drosophila melanogaster (Fruit fly)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
GO:0005739 C mitochondrion
GO:0005778 C peroxisomal membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007283 P spermatogenesis
GO:0009053 F electron donor activity
GO:0019395 P fatty acid oxidation
2574 BGIBMGA002574-TA
2004bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q7KML2 (49%/669)
Cluster: BcDNA.GH07485; n=11; Endopterygota|Rep: BcDNA.GH07485 - Drosophila melanogaster (Fruit fly)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
GO:0005739 C mitochondrion
GO:0005778 C peroxisomal membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007283 P spermatogenesis
GO:0009053 F electron donor activity
GO:0019395 P fatty acid oxidation
2575 BGIBMGA002575-TA
1998bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q7KML2 (49%/664)
Cluster: BcDNA.GH07485; n=11; Endopterygota|Rep: BcDNA.GH07485 - Drosophila melanogaster (Fruit fly)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
GO:0005739 C mitochondrion
GO:0005778 C peroxisomal membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007283 P spermatogenesis
GO:0009053 F electron donor activity
GO:0019395 P fatty acid oxidation
2576 BGIBMGA002576-TA
1965bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q7KML2 (46%/666)
Cluster: BcDNA.GH07485; n=11; Endopterygota|Rep: BcDNA.GH07485 - Drosophila melanogaster (Fruit fly)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
GO:0005739 C mitochondrion
GO:0005778 C peroxisomal membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007283 P spermatogenesis
GO:0009053 F electron donor activity
GO:0019395 P fatty acid oxidation
2577 BGIBMGA002577-TA
885bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q7KML2 (50%/286)
Cluster: BcDNA.GH07485; n=11; Endopterygota|Rep: BcDNA.GH07485 - Drosophila melanogaster (Fruit fly)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
GO:0005739 C mitochondrion
GO:0005778 C peroxisomal membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007283 P spermatogenesis
GO:0009053 F electron donor activity
GO:0019395 P fatty acid oxidation
2578 BGIBMGA002578-TA
999bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_Q7KML2 (45%/335)
Cluster: BcDNA.GH07485; n=11; Endopterygota|Rep: BcDNA.GH07485 - Drosophila melanogaster (Fruit fly)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F FAD binding
GO:0005739 C mitochondrion
GO:0005778 C peroxisomal membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007283 P spermatogenesis
GO:0009053 F electron donor activity
GO:0019395 P fatty acid oxidation
2579 BGIBMGA002579-TA
348bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_UPI0000E499B4 (36%/60)
Cluster: PREDICTED: similar to fibropellin Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to fibropellin Ia - Strongylocentrotus purpuratus
2580 BGIBMGA002580-TA
474bp
 Bomo_Chr5
chromo5/Bm_scaf20
5834375bp
UniRef50_P12428 (35%/134)
Cluster: Protein brown; n=2; Drosophila|Rep: Protein brown - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0031409 F pigment binding
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