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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1831 BGIBMGA001831-TA
429bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000D66E0F (39%/96)
Cluster: PREDICTED: hypothetical protein; n=1; Mus musculus|Rep: PREDICTED: hypothetical protein - Mus musculus
1832 BGIBMGA001832-TA
3420bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q17KP3 (43%/205)
Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-1 - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004386 F helicase activity
GO:0004525 F ribonuclease III activity
GO:0005524 F ATP binding
GO:0005622 C intracellular
GO:0006396 P RNA processing
1833 BGIBMGA001833-TA
3381bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q17KP3 (47%/333)
Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-1 - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004386 F helicase activity
GO:0004525 F ribonuclease III activity
GO:0005524 F ATP binding
GO:0005622 C intracellular
GO:0006396 P RNA processing
GO:0005634 C nucleus
GO:0000166 F nucleotide binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0007279 P pole cell formation
GO:0016246 P RNA interference
GO:0016442 C RNA-induced silencing complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0030422 P RNA interference, production of siRNA
GO:0031047 P RNA-mediated gene silencing
GO:0031054 P pre-microRNA processing
GO:0035087 P RNA interference, siRNA loading onto RISC
GO:0035196 P miRNA-mediated gene silencing, production of miRNAs
GO:0042078 P germ-line stem cell division
GO:0045448 P mitotic cell cycle, embryonic
1834 BGIBMGA001834-TA
474bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q86MA9 (77%/126)
Cluster: Dicer-1; n=5; Coelomata|Rep: Dicer-1 - Anopheles gambiae (African malaria mosquito)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004386 F helicase activity
GO:0004525 F ribonuclease III activity
GO:0005524 F ATP binding
GO:0005622 C intracellular
GO:0006396 P RNA processing
GO:0005634 C nucleus
GO:0000166 F nucleotide binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0007279 P pole cell formation
GO:0016246 P RNA interference
GO:0016442 C RNA-induced silencing complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0030422 P RNA interference, production of siRNA
GO:0031047 P RNA-mediated gene silencing
GO:0031054 P pre-microRNA processing
GO:0035087 P RNA interference, siRNA loading onto RISC
GO:0035196 P miRNA-mediated gene silencing, production of miRNAs
GO:0042078 P germ-line stem cell division
GO:0045448 P mitotic cell cycle, embryonic
1835 BGIBMGA001835-TA
459bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q17KP3 (66%/133)
Cluster: Dicer-1; n=2; Aedes aegypti|Rep: Dicer-1 - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004386 F helicase activity
GO:0004525 F ribonuclease III activity
GO:0005524 F ATP binding
GO:0005622 C intracellular
GO:0006396 P RNA processing
GO:0005634 C nucleus
GO:0000166 F nucleotide binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0007279 P pole cell formation
GO:0016246 P RNA interference
GO:0016442 C RNA-induced silencing complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0030422 P RNA interference, production of siRNA
GO:0031047 P RNA-mediated gene silencing
GO:0031054 P pre-microRNA processing
GO:0035087 P RNA interference, siRNA loading onto RISC
GO:0035196 P miRNA-mediated gene silencing, production of miRNAs
GO:0042078 P germ-line stem cell division
GO:0045448 P mitotic cell cycle, embryonic
1836 BGIBMGA001836-TA
2415bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D56B0C (45%/777)
Cluster: PREDICTED: similar to CG11326-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11326-PA, isoform A - Tribolium castaneum
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0007155 P cell adhesion
GO:0001501 P skeletal development
GO:0005201 F extracellular matrix structural constituent
GO:0005515 F protein binding
GO:0005578 C proteinaceous extracellular matrix
GO:0009887 P organ morphogenesis
1837 BGIBMGA001837-TA
522bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q38A01 (35%/80)
Cluster: Ubiquitin-protein ligase, putative; n=1; Trypanosoma brucei|Rep: Ubiquitin-protein ligase, putative - Trypanosoma brucei
GO:0004842 F ubiquitin-protein ligase activity
GO:0005622 C intracellular
GO:0006464 P protein modification process
GO:0006512 P ubiquitin cycle
GO:0016874 F ligase activity
GO:0006071 P glycerol metabolic process
GO:0008889 F glycerophosphodiester phosphodiesterase activity
1838 BGIBMGA001838-TA
1086bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000DB74D2 (36%/109)
Cluster: PREDICTED: similar to CG12851-PA; n=2; Apis mellifera|Rep: PREDICTED: similar to CG12851-PA - Apis mellifera
1839 BGIBMGA001839-TA
471bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q16Y38 (26%/110)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
1840 BGIBMGA001840-TA
198bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q9U4Z4 (60%/66)
Cluster: Sensory appendage protein 5; n=4; Obtectomera|Rep: Sensory appendage protein 5 - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005515 F protein binding
1841 BGIBMGA001841-TA
1680bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_A4UA25 (32%/457)
Cluster: Esterase; n=3; Obtectomera|Rep: Esterase - Spodoptera littoralis (Egyptian cotton leafworm)
GO:0016787 F hydrolase activity
GO:0004104 F cholinesterase activity
1842 BGIBMGA001842-TA
1959bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B5A57 (32%/580)
Cluster: PREDICTED: similar to conserved hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to conserved hypothetical protein - Nasonia vitripennis
GO:0005515 F protein binding
1843 BGIBMGA001843-TA
732bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D5771A (43%/53)
Cluster: PREDICTED: similar to Bardet-Biedl syndrome 4 protein; n=1; Tribolium castaneum|Rep: PREDICTED: similar to Bardet-Biedl syndrome 4 protein - Tribolium castaneum
GO:0005488 F binding
GO:0000242 C pericentriolar material
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0051297 P centrosome organization and biogenesis
1844 BGIBMGA001844-TA
165bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
(no hit)
1845 BGIBMGA001845-TA
711bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q4SCG3 (23%/105)
Cluster: Chromosome undetermined SCAF14653, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF14653, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0006915 P apoptosis
GO:0042981 P regulation of apoptosis
GO:0004046 F aminoacylase activity
GO:0006508 P proteolysis
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
1846 BGIBMGA001846-TA
1140bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI000150A2B4 (22%/162)
Cluster: Poly polymerase central domain containing protein; n=1; Tetrahymena thermophila SB210|Rep: Poly polymerase central domain containing protein - Tetrahymena thermophila SB210
GO:0004871 F signal transducer activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0016020 C membrane
1847 BGIBMGA001847-TA
1815bp
 Bomo_Scaf051
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B52B1 (50%/399)
Cluster: PREDICTED: similar to Nicalin; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Nicalin - Nasonia vitripennis
1848 BGIBMGA001848-TA
1023bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D55E5E (33%/172)
Cluster: PREDICTED: similar to CG14076-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG14076-PA - Tribolium castaneum
1849 BGIBMGA001849-TA
2112bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_P26639 (69%/702)
Cluster: Threonyl-tRNA synthetase, cytoplasmic; n=131; Eukaryota|Rep: Threonyl-tRNA synthetase, cytoplasmic - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004829 F threonine-tRNA ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005625 C soluble fraction
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006435 P threonyl-tRNA aminoacylation
GO:0016874 F ligase activity
1850 BGIBMGA001850-TA
723bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B4C0B (35%/210)
Cluster: PREDICTED: similar to conserved hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to conserved hypothetical protein - Nasonia vitripennis
GO:0016020 C membrane
GO:0016787 F hydrolase activity
1851 BGIBMGA001851-TA
1677bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q16G91 (19%/524)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005622 C intracellular
GO:0006886 P intracellular protein transport
1852 BGIBMGA001852-TA
10131bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B5B49 (41%/740)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
1853 BGIBMGA001853-TA
1662bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_P35381 (87%/550)
Cluster: ATP synthase subunit alpha, mitochondrial precursor; n=847; cellular organisms|Rep: ATP synthase subunit alpha, mitochondrial precursor - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005811 C lipid particle
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007286 P spermatid development
GO:0015078 F hydrogen ion transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transport
GO:0016020 C membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016787 F hydrolase activity
GO:0016820 F hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0040007 P growth
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046872 F metal ion binding
GO:0046933 F hydrogen ion transporting ATP synthase activity, rotational mechanism
GO:0046961 F hydrogen ion transporting ATPase activity, rotational mechanism
GO:0005215 F transporter activity
GO:0005624 C membrane fraction
GO:0005743 C mitochondrial inner membrane
GO:0005753 C mitochondrial proton-transporting ATP synthase complex
GO:0042777 P plasma membrane ATP synthesis coupled proton transport
1854 BGIBMGA001854-TA
1053bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B5519 (31%/259)
Cluster: PREDICTED: similar to GA21059-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to GA21059-PA - Nasonia vitripennis
1855 BGIBMGA001855-TA
477bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_A2ZQ22 (32%/82)
Cluster: Putative uncharacterized protein; n=3; Oryza sativa|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice)
1856 BGIBMGA001856-TA
1083bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D5761F (38%/178)
Cluster: PREDICTED: similar to CG10175-PC, isoform C; n=3; Tribolium castaneum|Rep: PREDICTED: similar to CG10175-PC, isoform C - Tribolium castaneum
GO:0016787 F hydrolase activity
1857 BGIBMGA001857-TA
3831bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q8SXJ4 (41%/162)
Cluster: RE19838p; n=1; Drosophila melanogaster|Rep: RE19838p - Drosophila melanogaster (Fruit fly)
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0008061 F chitin binding
1858 BGIBMGA001858-TA
1590bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B625D (29%/245)
Cluster: PREDICTED: similar to hCG1811879; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to hCG1811879 - Nasonia vitripennis
1859 BGIBMGA001859-TA
12462bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q9VAV5 (55%/1867)
Cluster: CG1842-PA; n=6; Eumetazoa|Rep: CG1842-PA - Drosophila melanogaster (Fruit fly)
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0007018 P microtubule-based movement
GO:0016887 F ATPase activity
GO:0030286 C dynein complex
1860 BGIBMGA001860-TA
537bp
 Bomo_Chr19
chromo19/Bm_scaf28
4702674bp
UniRef50_Q5MGF9 (39%/78)
Cluster: Putative uncharacterized protein; n=1; Lonomia obliqua|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0016787 F hydrolase activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0045449 P regulation of transcription
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