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Last updated: 2022/11/18

Search Silkworm GeneModel

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No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1801 BGIBMGA001801-TA
1227bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9Y230 (74%/298)
Cluster: RuvB-like 2; n=107; Eukaryota|Rep: RuvB-like 2 - Homo sapiens (Human)
GO:0016887 F ATPase activity
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0003678 F DNA helicase activity
GO:0003684 F damaged DNA binding
GO:0004003 F ATP-dependent DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016568 P chromatin modification
GO:0016787 F hydrolase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0042802 F identical protein binding
GO:0051082 F unfolded protein binding
1802 BGIBMGA001802-TA
2121bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000D56147 (34%/104)
Cluster: PREDICTED: similar to CG31342-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG31342-PA - Tribolium castaneum
GO:0005515 F protein binding
1803 BGIBMGA001803-TA
1533bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI00015B525D (42%/502)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0004177 F aminopeptidase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0016806 F dipeptidyl-peptidase and tripeptidyl-peptidase activity
GO:0004178 F leucyl aminopeptidase activity
GO:0016787 F hydrolase activity
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1804 BGIBMGA001804-TA
4191bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000DA1C28 (25%/356)
Cluster: PREDICTED: similar to zinc finger protein 420; n=1; Rattus norvegicus|Rep: PREDICTED: similar to zinc finger protein 420 - Rattus norvegicus
1805 BGIBMGA001805-TA
1032bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000D55AA9 (55%/311)
Cluster: PREDICTED: similar to CG2101-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2101-PA - Tribolium castaneum
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0042769 P DNA damage response, detection of DNA damage
GO:0043043 P peptide biosynthetic process
1806 BGIBMGA001806-TA
684bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_O43809 (86%/196)
Cluster: Cleavage and polyadenylation specificity factor subunit 5; n=34; Bilateria|Rep: Cleavage and polyadenylation specificity factor subunit 5 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005813 C centrosome
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0042382 C paraspeckles
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005524 F ATP binding
GO:0006298 P mismatch repair
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006885 P regulation of pH
GO:0008324 F cation transmembrane transporter activity
GO:0015299 F solute:hydrogen antiporter activity
GO:0016021 C integral to membrane
GO:0030983 F mismatched DNA binding
1807 BGIBMGA001807-TA
1242bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI00003C0698 (26%/216)
Cluster: PREDICTED: similar to CG6696-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG6696-PA - Apis mellifera
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008533 F astacin activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1808 BGIBMGA001808-TA
2040bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q7JWI7 (45%/630)
Cluster: RE60337p; n=5; Diptera|Rep: RE60337p - Drosophila melanogaster (Fruit fly)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016021 C integral to membrane
1809 BGIBMGA001809-TA
1251bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q7JWI7 (41%/352)
Cluster: RE60337p; n=5; Diptera|Rep: RE60337p - Drosophila melanogaster (Fruit fly)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016021 C integral to membrane
1810 BGIBMGA001810-TA
1437bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9I7I8 (66%/173)
Cluster: Oxysterol-binding protein; n=13; Eumetazoa|Rep: Oxysterol-binding protein - Drosophila melanogaster (Fruit fly)
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0005829 C cytosol
GO:0006893 P Golgi to plasma membrane transport
GO:0008142 F oxysterol binding
GO:0008203 P cholesterol metabolic process
GO:0030301 P cholesterol transport
1811 BGIBMGA001811-TA
1833bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9I7I8 (52%/391)
Cluster: Oxysterol-binding protein; n=13; Eumetazoa|Rep: Oxysterol-binding protein - Drosophila melanogaster (Fruit fly)
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0005829 C cytosol
GO:0006893 P Golgi to plasma membrane transport
GO:0008142 F oxysterol binding
GO:0008203 P cholesterol metabolic process
GO:0030301 P cholesterol transport
GO:0005515 F protein binding
1812 BGIBMGA001812-TA
738bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI00015B4747 (36%/195)
Cluster: PREDICTED: similar to ENSANGP00000011164; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000011164 - Nasonia vitripennis
GO:0006118 P electron transport
GO:0016491 F oxidoreductase activity
1813 BGIBMGA001813-TA
750bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000D56826 (48%/108)
Cluster: PREDICTED: similar to CG6034-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG6034-PA - Tribolium castaneum
GO:0006118 P electron transport
GO:0016491 F oxidoreductase activity
1814 BGIBMGA001814-TA
2055bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000DB7C8A (34%/154)
Cluster: PREDICTED: similar to CG3731-PB, isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar to CG3731-PB, isoform B - Apis mellifera
1815 BGIBMGA001815-TA
627bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q4UH79 (25%/172)
Cluster: Putative uncharacterized protein; n=1; Theileria annulata|Rep: Putative uncharacterized protein - Theileria annulata
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0006259 P DNA metabolic process
GO:0016887 F ATPase activity
GO:0051276 P chromosome organization and biogenesis
GO:0051277 P chromosome organization and biogenesis (sensu Bacteria)
1816 BGIBMGA001816-TA
717bp
 Bomo_Chr8
chromo11/Bm_scaf35
4373199bp
UniRef50_Q24310 (36%/226)
Cluster: Polyprotein; n=1; Drosophila melanogaster|Rep: Polyprotein - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0006278 P RNA-dependent DNA replication
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006695 P cholesterol biosynthetic process
GO:0008284 P positive regulation of cell proliferation
GO:0045944 P positive regulation of transcription from RNA polymerase II promoter
GO:0046872 F metal ion binding
1817 BGIBMGA001817-TA
1869bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9NZW4 (21%/276)
Cluster: Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)]; n=72; Mammalia|Rep: Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] - Homo sapiens (Human)
GO:0001501 P skeletal development
GO:0001503 P ossification
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005518 F collagen binding
GO:0005578 C proteinaceous extracellular matrix
GO:0007275 P multicellular organismal development
GO:0007605 P sensory perception of sound
1818 BGIBMGA001818-TA
5412bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9VCH5 (59%/118)
Cluster: CG10198-PA; n=39; melanogaster subgroup|Rep: CG10198-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005643 C nuclear pore
GO:0006810 P transport
1819 BGIBMGA001819-TA
567bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q557G1 (27%/131)
Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein amino acid phosphorylation
GO:0003824 F catalytic activity
1820 BGIBMGA001820-TA
1275bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000DA4608 (22%/249)
Cluster: PREDICTED: similar to gamma-aminobutyric acid A receptor, epsilon; n=2; Rattus norvegicus|Rep: PREDICTED: similar to gamma-aminobutyric acid A receptor, epsilon - Rattus norvegicus
1821 BGIBMGA001821-TA
486bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_A2QBQ3 (25%/88)
Cluster: Similar lenght is not described. precursor; n=1; Aspergillus niger|Rep: Similar lenght is not described. precursor - Aspergillus niger
GO:0004339 F glucan 1,4-alpha-glucosidase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0005576 C extracellular region
GO:0006952 P defense response
GO:0009405 P pathogenesis
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006936 P muscle contraction
GO:0007315 P pole plasm assembly
GO:0045451 P pole plasm oskar mRNA localization
GO:0048813 P dendrite morphogenesis
1822 BGIBMGA001822-TA
735bp
 Bomo_Chr15
chromo11/Bm_scaf35
4373199bp
UniRef50_Q8RV60 (41%/231)
Cluster: Putative uncharacterized protein At2g05640; n=2; rosids|Rep: Putative uncharacterized protein At2g05640 - Arabidopsis thaliana (Mouse-ear cress)
1823 BGIBMGA001823-TA
396bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q4KME1 (48%/102)
Cluster: Zgc:112047; n=9; Coelomata|Rep: Zgc:112047 - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0007264 P small GTPase mediated signal transduction
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
1824 BGIBMGA001824-TA
810bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q297Y3 (31%/77)
Cluster: GA10553-PA; n=1; Drosophila pseudoobscura|Rep: GA10553-PA - Drosophila pseudoobscura (Fruit fly)
1825 BGIBMGA001825-TA
420bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9Y4Z0 (85%/99)
Cluster: U6 snRNA-associated Sm-like protein LSm4; n=5; Coelomata|Rep: U6 snRNA-associated Sm-like protein LSm4 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005688 C snRNP U6
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-dependent
1826 BGIBMGA001826-TA
282bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
(no hit)
1827 BGIBMGA001827-TA
1005bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9VSR3 (87%/290)
Cluster: Probable RNA-binding protein orb2; n=4; Sophophora|Rep: Probable RNA-binding protein orb2 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
1828 BGIBMGA001828-TA
2259bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_Q17BP6 (25%/154)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
1829 BGIBMGA001829-TA
675bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000DB6C62 (55%/146)
Cluster: PREDICTED: similar to XPMC2 prevents mitotic catastrophe 2 homolog; n=1; Apis mellifera|Rep: PREDICTED: similar to XPMC2 prevents mitotic catastrophe 2 homolog - Apis mellifera
1830 BGIBMGA001830-TA
552bp
 Bomo_Chr11
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000DB6C62 (31%/167)
Cluster: PREDICTED: similar to XPMC2 prevents mitotic catastrophe 2 homolog; n=1; Apis mellifera|Rep: PREDICTED: similar to XPMC2 prevents mitotic catastrophe 2 homolog - Apis mellifera
GO:0003676 F nucleic acid binding
GO:0003700 F transcription factor activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0016787 F hydrolase activity
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